RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TLR3O15455 904 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 HIP1RO75146 1068 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 MICAL2O94851 1124 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 ABLIM3O94929 683 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 CELF2O95319 508 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 SMTNP53814 917 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 SATB1Q01826 763 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 LMNB2Q03252 620 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 GABPB1Q06547 395 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 CCDC158Q5M9N0 1113 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 C6orf118Q5T5N4 469 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 RNF219Q5W0B1 726 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 MRM1Q6IN84 353 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 CXorf57Q6NSI4 855 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 MRPL14Q6P1L8 145 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 MMS22LQ6ZRQ5 1243 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 LSRQ86X29 649 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 DZIP1Q86YF9 867 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 CLASRPQ8N2M8 674 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF384Q8TF68 577 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 TBC1D22AQ8WUA7 517 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 TEKT1Q969V4 418 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 SKA1Q96BD8 255 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 DCPSQ96C86 337 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 EDC3Q96F86 508 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 TRMT2BQ96GJ1 504 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 MPP4Q96JB8 637 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 PRMT6Q96LA8 375 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 KCTD15Q96SI1 283 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 LRRCC1Q9C099 1032 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 ANTXR1Q9H6X2 564 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 DCTPP1Q9H773 170 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 TDRD3Q9H7E2 651 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 PLCB1Q9NQ66 1216 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 PIH1D3Q9NQM4 214 aaKnown RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 CLIC5Q9NZA1 410 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 PGAP2Q9UHJ9 254 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 TRHDEQ9UKU6 1024 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF232Q9UNY5 417 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 FZD1Q9UP38 647 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 DAGLAQ9Y4D2 1042 aa5.24□□□□□ -1.57
SF3B1-202ENST00000409915 MORC2Q9Y6X9 1032 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-202ENST00000409915 SALL1Q9NSC2 1324 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 DNAJC25-GNG10A0A024R161 153 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CCDC66A2RUB6 948 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 TCP10L2B9ZVM9 353 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 IGHDP01880 384 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 APPP05067 770 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CYP2E1P05181 493 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 PGRP06401 933 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 UQCRFS1P1P0C7P4 283 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 FCGRTP55899 365 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 MECOMQ03112 1051 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 GRM1Q13255 1194 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 BIRC3Q13489 604 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 PRKG1Q13976 671 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 TOMM20Q15388 145 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 LONRF2Q1L5Z9 754 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CCDC96Q2M329 555 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 COBLL1Q53SF7 1204 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 INTS6LQ5JSJ4 861 aaKnown RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 HYIQ5T013 277 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CST9Q5W186 159 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 APOBEC3HQ6NTF7 200 aaKnown RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CTR9Q6PD62 1173 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 C1orf228Q6PIY5 440 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 TOGARAM2Q6ZUX3 1019 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 MOB2Q70IA6 237 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 SV2BQ7L1I2 683 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CDC37L1Q7L3B6 337 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF438Q7Z4V0 828 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 ADGRA1Q86SQ6 560 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 LRRTM3Q86VH5 581 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 GALNT12Q8IXK2 581 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 FAM178BQ8IXR5 827 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 FBXO27Q8NI29 283 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 USP33Q8TEY7 942 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 LEO1Q8WVC0 666 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 CDCA5Q96FF9 252 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 KIF2CQ99661 725 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 RUSC1Q9BVN2 902 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 SPATA9Q9BWV2 254 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 TRIM8Q9BZR9 551 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 LRRC27Q9C0I9 530 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 NCOA5Q9HCD5 579 aaKnown RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 LUC7LQ9NQ29 371 aaKnown RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 LRP2BPQ9P2M1 347 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 NXF1Q9UBU9 619 aaKnown RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF70Q9UC06 446 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 IP6K2Q9UHH9 426 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 PPM1HQ9ULR3 514 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 FAM50BQ9Y247 325 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 IPPQ9Y573 584 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 SSC5DA1L4H1 1573 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 AKAP11Q9UKA4 1901 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 MAST3O60307 1309 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 PDS5AQ29RF7 1337 aaKnown RBP5.23□□□□□ -1.57
SF3B1-202ENST00000409915 PITPNM2Q9BZ72 1349 aa5.23□□□□□ -1.57
SF3B1-202ENST00000409915 PCNTO95613 3336 aa5.22□□□□□ -1.57
SF3B1-202ENST00000409915 MAST2Q6P0Q8 1798 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms