RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MMRN2Q9H8L6 949 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 LTN1O94822 1766 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 TLDC2A0PJX2 215 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 WFS1O76024 890 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 MYL1P05976 194 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 RNASELQ05823 741 aaKnown RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 MYLK4Q86YV6 388 aaPredicted RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 MMADHCQ9H3L0 296 aaPredicted RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 RNPEPL1Q9HAU8 725 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 DNAAF2Q9NVR5 837 aaKnown RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 USP15Q9Y4E8 981 aaPredicted RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.18
HERC3-203ENST00000407637 CYP27B1O15528 508 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 CREB3O43889 395 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 BMP15O95972 392 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 KLRC1P26715 233 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 CASP7P55210 303 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 FOXO4P98177 505 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 DYNC1I2Q13409 638 aaKnown RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 MYBPC3Q14896 1274 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 ASTE1Q2TB18 679 aaPredicted RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 OR52E8Q6IFG1 317 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 HOOK3Q86VS8 718 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 ZSCAN29Q8IWY8 852 aaPredicted RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.95□□□□□ -0.18
HERC3-203ENST00000407637 UCMAQ8WVF2 138 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 AZI2Q9H6S1 392 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 SUDS3Q9H7L9 328 aaPredicted RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 LRP6O75581 1613 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 ARHGAP23Q9P227 1491 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 BHMG1C9JSJ3 638 aaPredicted RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 IFI35P80217 286 aaPredicted RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 ANKRD23Q86SG2 305 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 UTP4Q969X6 686 aaKnown RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 IFT43Q96FT9 208 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
HERC3-203ENST00000407637 FGFR1OP2Q9NVK5 253 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.95□□□□□ -0.18
HERC3-203ENST00000407637 AMACRQ9UHK6 382 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 TACC3Q9Y6A5 838 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 NID2Q14112 1375 aa13.95□□□□□ -0.18
HERC3-203ENST00000407637 EYA2O00167 538 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 CEP104O60308 925 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 PEX11AO75192 247 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 PEX5P50542 639 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 KIAA0753Q2KHM9 967 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 ANKRD40Q6AI12 368 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 SDCCAG8Q86SQ7 713 aaPredicted RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 TAF4BQ92750 862 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 DTNBP1Q96EV8 351 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 KLRC4O43908 158 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 CALB2P22676 271 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 GBP7Q8N8V2 638 aaPredicted RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 CELF4Q9BZC1 486 aaKnown RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 BAZ2BQ9UIF8 2168 aaKnown RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 TTI1O43156 1089 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 TPBGLP0DKB5 382 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 ACADSP16219 412 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 ABCD1P33897 745 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 PDE6CP51160 858 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 EIF3BP55884 814 aaKnown RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 NAB2Q15742 525 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 APBB1IPQ7Z5R6 666 aaPredicted RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 FAM114A1Q8IWE2 563 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
HERC3-203ENST00000407637 BAP1Q92560 729 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 P2RX5Q93086 422 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 CCDC113Q9H0I3 377 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 GOPCQ9HD26 462 aa13.94□□□□□ -0.18
HERC3-203ENST00000407637 H0Y3Z8 333 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 PDLIM1O00151 329 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 SUN1O94901 812 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 ITGA4P13612 1032 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 MCM7P33993 719 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 KIAA0825Q8IV33 1275 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 STK32AQ8WU08 396 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 DNAJC9Q8WXX5 260 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
HERC3-203ENST00000407637 PLIN2Q99541 437 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 PYM1Q9BRP8 204 aaKnown RBP13.93□□□□□ -0.18
HERC3-203ENST00000407637 PHF20Q9BVI0 1012 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 VCXQ9H320 206 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 ZWILCHQ9H900 591 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 CYP39A1Q9NYL5 469 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 ABCF2Q9UG63 623 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 NOC2LQ9Y3T9 749 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms