RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 PXMP2Q9NR77 195 aa16.11■□□□□ 0.17
FAM3B-204ENST00000398652 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
FAM3B-204ENST00000398652 BARX2Q9UMQ3 279 aaPredicted RBP16.11■□□□□ 0.17
FAM3B-204ENST00000398652 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
FAM3B-204ENST00000398652 MYO10Q9HD67 2058 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 GGPS1O95749 300 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 ATF7P17544 494 aaPredicted RBP16.1■□□□□ 0.17
FAM3B-204ENST00000398652 DNAJB1P25685 340 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 ID4P47928 161 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 NAALADL2Q58DX5 795 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
FAM3B-204ENST00000398652 FAM26DQ5JW98 314 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 ZNF689Q96CS4 500 aaPredicted RBP16.1■□□□□ 0.17
FAM3B-204ENST00000398652 RNPEPQ9H4A4 650 aa16.1■□□□□ 0.17
FAM3B-204ENST00000398652 SORBS3O60504 671 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 RGS20O76081 388 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
FAM3B-204ENST00000398652 NRIP1P48552 1158 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 HS6ST3Q8IZP7 471 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 RIPOR3Q96MK2 946 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 TTC14Q96N46 770 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 CPVLQ9H3G5 476 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
FAM3B-204ENST00000398652 CCDC171Q6TFL3 1326 aa16.09■□□□□ 0.17
FAM3B-204ENST00000398652 LOXHD1Q8IVV2 1947 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 CCER2I3L3R5 266 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 DGKIO75912 1065 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 PDGFBP01127 241 aaPredicted RBP16.08■□□□□ 0.16
FAM3B-204ENST00000398652 LGALS2P05162 132 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 ITGB1P05556 798 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 GNAT1P11488 350 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 UBA1P22314 1058 aaKnown RBP16.08■□□□□ 0.16
FAM3B-204ENST00000398652 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 SUSD6Q92537 303 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
FAM3B-204ENST00000398652 MRPL11Q9Y3B7 192 aaKnown RBP16.08■□□□□ 0.16
FAM3B-204ENST00000398652 MRPL42Q9Y6G3 142 aaKnown RBP16.08■□□□□ 0.16
FAM3B-204ENST00000398652 DMDP11532 3685 aa16.07■□□□□ 0.16
FAM3B-204ENST00000398652 SP2Q02086 613 aa16.07■□□□□ 0.16
FAM3B-204ENST00000398652 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
FAM3B-204ENST00000398652 PDCD2LQ9BRP1 358 aa16.07■□□□□ 0.16
FAM3B-204ENST00000398652 EHMT1Q9H9B1 1298 aa16.07■□□□□ 0.16
FAM3B-204ENST00000398652 MLXIPQ9HAP2 919 aa16.07■□□□□ 0.16
FAM3B-204ENST00000398652 SETD4Q9NVD3 440 aa16.07■□□□□ 0.16
FAM3B-204ENST00000398652 TTC41PQ6P2S7 1318 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 ENPP3O14638 875 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 CHRNA1P02708 482 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 TGFB3P10600 412 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 GHRP10912 638 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
FAM3B-204ENST00000398652 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 ZBTB33Q86T24 672 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 CMTR2Q8IYT2 770 aaKnown RBP16.06■□□□□ 0.16
FAM3B-204ENST00000398652 KLHL23Q8NBE8 558 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 POF1BQ8WVV4 589 aa16.06■□□□□ 0.16
FAM3B-204ENST00000398652 NKD2Q969F2 451 aaPredicted RBP16.06■□□□□ 0.16
FAM3B-204ENST00000398652 CFBP00751 764 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 HSD17B4P51659 736 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 ADAM17P78536 824 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 GHRHRQ02643 423 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 ALX1Q15699 326 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 MCTP2Q6DN12 878 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 ADGRF4Q8IZF3 695 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
FAM3B-204ENST00000398652 VPS13AQ96RL7 3174 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 FNDC1Q4ZHG4 1894 aaPredicted RBP16.04■□□□□ 0.16
FAM3B-204ENST00000398652 FSD2A1L4K1 749 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
FAM3B-204ENST00000398652 ARHGAP4P98171 946 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 LPIN1Q14693 890 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 ADSSL1Q8N142 457 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 TMEM105Q8N8V8 129 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 ATP8B4Q8TF62 1192 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 TLE6Q9H808 572 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
FAM3B-204ENST00000398652 EP300Q09472 2414 aaPredicted RBP16.04■□□□□ 0.16
FAM3B-204ENST00000398652 ZNF292O60281 2723 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 OPLAHO14841 1288 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 MGAT3Q09327 533 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 PGM5Q15124 567 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 VN1R2Q8NFZ6 395 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 GPKOWQ92917 476 aaPredicted RBP eCLIP16.03■□□□□ 0.16
FAM3B-204ENST00000398652 MAP3K20Q9NYL2 800 aaKnown RBP16.03■□□□□ 0.16
FAM3B-204ENST00000398652 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
FAM3B-204ENST00000398652 LAMA4Q16363 1823 aa16.03■□□□□ 0.16
FAM3B-204ENST00000398652 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.16
FAM3B-204ENST00000398652 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.16
FAM3B-204ENST00000398652 MTMR3Q13615 1198 aa16.02■□□□□ 0.16
FAM3B-204ENST00000398652 TAF2Q6P1X5 1199 aa16.02■□□□□ 0.16
FAM3B-204ENST00000398652 TRIM50Q86XT4 487 aa16.02■□□□□ 0.16
FAM3B-204ENST00000398652 UBALD2Q8IYN6 164 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms