RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PCDHB10Q9UN67 800 aa5.97□□□□□ -1.45
GABPB1-204ENST00000396464 DIS3Q9Y2L1 958 aaKnown RBP5.97□□□□□ -1.45
GABPB1-204ENST00000396464 POLR3KQ9Y2Y1 108 aaPredicted RBP5.97□□□□□ -1.45
GABPB1-204ENST00000396464 TRAV20A0A0B4J274 112 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 A0A1W2PQU0 124 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 MEIS3P2A8K0S8 358 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 C9IYK1 514 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 GFRA2O00451 464 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ORC4O43929 436 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 NUAK1O60285 661 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 GRIN3BO60391 1043 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ATE1O95260 518 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 MT-CO1P00395 513 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ESR1P03372 595 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 LTKP29376 864 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ALDH5A1P51649 535 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ERVFC1P60507 584 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 EGR3Q06889 387 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 TBX2Q13207 712 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 PDE1CQ14123 709 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 CDC37Q16543 378 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ATP13A4Q4VNC1 1196 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 FAM133BQ5BKY9 247 aaKnown RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 TMEM240Q5SV17 173 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 HEATR6Q6AI08 1181 aaKnown RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 KIAA1211LQ6NV74 962 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 BRAPQ7Z569 592 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 ANKRD23Q86SG2 305 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 IPO9Q96P70 1041 aaKnown RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 CENPOQ9BU64 300 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 NAA15Q9BXJ9 866 aaKnown RBP5.96□□□□□ -1.46
GABPB1-204ENST00000396464 SLC12A5Q9H2X9 1139 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 KCNK12Q9HB15 430 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 CEP131Q9UPN4 1083 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 GIT1Q9Y2X7 761 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 SLC12A7Q9Y666 1083 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 LTBP3Q9NS15 1303 aa5.96□□□□□ -1.46
GABPB1-204ENST00000396464 J3KRW8 73 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 ETV2O00321 342 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-204ENST00000396464 OPA1O60313 960 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 HPXP02790 462 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 PYGMP11217 842 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 CCND1P24385 295 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 RXRGP48443 463 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 FAM193AP78312 1265 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 ZBED6P86452 979 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 RBM10P98175 930 aaKnown RBP5.95□□□□□ -1.46
GABPB1-204ENST00000396464 SLC9A5Q14940 896 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 TRIM61Q5EBN2 209 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 MZT2BQ6NZ67 158 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 C1orf122Q6ZSJ8 110 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 OTOP3Q7RTS5 596 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 FGD2Q7Z6J4 655 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 ZSCAN30Q86W11 494 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 MCATQ8IVS2 390 aaKnown RBP5.95□□□□□ -1.46
GABPB1-204ENST00000396464 SLC7A14Q8TBB6 771 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 KLHL6Q8WZ60 621 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 TBATAQ96M53 351 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 AIFM3Q96NN9 605 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 MENTQ9BUN1 341 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 ADAM30Q9UKF2 790 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 NUB1Q9Y5A7 615 aa5.95□□□□□ -1.46
GABPB1-204ENST00000396464 M0R2C6 588 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 AGRPO00253 132 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 ZEB2O60315 1214 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 SLC5A1P13866 664 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 ZKSCAN1P17029 563 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 GLDCP23378 1020 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 MAPK9P45984 424 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 RECQLP46063 649 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 YARSP54577 528 aaKnown RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 USP14P54578 494 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 SUMO1P63165 101 aaKnown RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 RPL6Q02878 288 aaKnown RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 PCBP2Q15366 365 aaKnown RBP eCLIP5.94□□□□□ -1.465e-39■■■■■ 107
GABPB1-204ENST00000396464 INAVAQ3KP66 663 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 SPECC1Q5M775 1068 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 TSHZ3Q63HK5 1081 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 TTLL5Q6EMB2 1281 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 TMEM132EQ6IEE7 984 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 TAB3Q8N5C8 712 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 KIAA1958Q8N8K9 716 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 PDZD8Q8NEN9 1154 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 AARSD1Q9BTE6 412 aaKnown RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 CRB3Q9BUF7 120 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 OSBPL5Q9H0X9 879 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 SLC6A17Q9H1V8 727 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 RETREG1Q9H6L5 497 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 PHAXQ9H814 394 aaKnown RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 CWC25Q9NXE8 425 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 NDOR1Q9UHB4 597 aa5.94□□□□□ -1.46
GABPB1-204ENST00000396464 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
GABPB1-204ENST00000396464 WASH4PA8MWX3 477 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 K7ESF4 209 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 LTFP02788 710 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 KRT1P04264 644 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 ASLP04424 464 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 JMJD7P0C870 316 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 MED14OSP0DP75 135 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 ACRP10323 421 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms