RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 LSP1P33241 339 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 KIR2DL1P43626 348 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 KIR2DL2P43627 348 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 RECQLP46063 649 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 RTP1P59025 263 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 ZNF174Q15697 407 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 MROH9Q5TGP6 573 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 CXorf57Q6NSI4 855 aaKnown RBP6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 PGM2L1Q6PCE3 622 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 RBM12BQ8IXT5 1001 aaKnown RBP6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 CMTR2Q8IYT2 770 aaKnown RBP6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 SLC39A13Q96H72 371 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 SLAMF8Q9P0V8 285 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 RIPOR2Q9Y4F9 1068 aa6.62□□□□□ -1.35
HMGB1P10-201ENST00000395823 FAM181BA6NEQ2 426 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 TPD52L2O43399 206 aaKnown RBP6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 KDM1AO60341 852 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 ZRANB2O95218 330 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 TMEM253P0C7T8 217 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 PF4V1P10720 104 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 HTRA3P83110 453 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 KCNMA1Q12791 1236 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 UBE4AQ14139 1066 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CEP128Q6ZU80 1094 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 SPRED2Q7Z698 418 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CERS3Q8IU89 383 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CCAR1Q8IX12 1150 aaKnown RBP6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 BCL7CQ8WUZ0 217 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 PCIF1Q9H4Z3 704 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 ANLNQ9NQW6 1124 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CHST12Q9NRB3 414 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 CCM2LQ9NUG4 571 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 LMCD1Q9NZU5 365 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 ZBTB21Q9ULJ3 1066 aa6.61□□□□□ -1.35
HMGB1P10-201ENST00000395823 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 FAM90A27PA6NNH2 459 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 VSTM5A8MXK1 200 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 DYRK3O43781 588 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 CAND2O75155 1236 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 LTFP02788 710 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 C4BPAP04003 597 aaKnown RBP6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 PROCP04070 461 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 NTRK1P04629 796 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 EPHA5P54756 1037 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 DUSP4Q13115 394 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 MOGSQ13724 837 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ZNF574Q6ZN55 896 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 KCTD1Q719H9 257 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 EPM2AIP1Q7L775 607 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ZNF496Q96IT1 587 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 C16orf92Q96LL3 132 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ALPK1Q96QP1 1244 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ORAI2Q96SN7 254 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 SEMA4AQ9H3S1 761 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 SP110Q9HB58 689 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ACSS2Q9NR19 701 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 KCNH7Q9NS40 1196 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ACSL6Q9UKU0 697 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ANKRD6Q9Y2G4 727 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 NOC2LQ9Y3T9 749 aaKnown RBP6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 ATP23Q9Y6H3 246 aa6.6□□□□□ -1.35
HMGB1P10-201ENST00000395823 GOLGA8AA7E2F4 631 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 GOLGA8BA8MQT2 603 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 SLC27A2O14975 620 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 HIP1RO75146 1068 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 TADA3O75528 432 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 CFBP00751 764 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 CD8BP10966 210 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 LPOP22079 712 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 CCND1P24385 295 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 ZP2Q05996 745 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 STEAP3Q658P3 488 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 SLC51AQ86UW1 340 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 PNMA8AQ86V59 439 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 TGFBRAP1Q8WUH2 860 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 RTF1Q92541 710 aaKnown RBP6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 PDLIM7Q9NR12 457 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 OBP2AQ9NY56 170 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 TMEM59LQ9UK28 342 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 PNMA8BQ9ULN7 279 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 GIT1Q9Y2X7 761 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 TAF6LQ9Y6J9 622 aa6.59□□□□□ -1.35
HMGB1P10-201ENST00000395823 PLEKHD1A6NEE1 506 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 NRDCO43847 1150 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 BUB1BO60566 1050 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 CYP17A1P05093 508 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 CT47B1P0C2W7 299 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 GLI4P10075 376 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 PTPN1P18031 435 aaKnown RBP6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 SLC6A11P48066 632 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 TUSC3Q13454 348 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 GFOD2Q3B7J2 385 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms