RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 TANGO6Q9C0B7 1094 aa20.53■□□□□ 0.88
STRADB-202ENST00000392249 KIAA1683Q9H0B3 1180 aa20.53■□□□□ 0.88
STRADB-202ENST00000392249 COL4A3BPQ9Y5P4 624 aa20.53■□□□□ 0.88
STRADB-202ENST00000392249 CTNND1O60716 968 aaKnown RBP20.52■□□□□ 0.88
STRADB-202ENST00000392249 NBPF12Q5TAG4 269 aaPredicted RBP20.52■□□□□ 0.88
STRADB-202ENST00000392249 SFR1Q86XK3 245 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 PIGOQ8TEQ8 1089 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 FBXO41Q8TF61 875 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 HSD17B14Q9BPX1 270 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 RUSC1Q9BVN2 902 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 KCTD10Q9H3F6 313 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 FAM207AQ9NSI2 230 aaPredicted RBP20.52■□□□□ 0.88
STRADB-202ENST00000392249 SIK3Q9Y2K2 1263 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 RBBP6Q7Z6E9 1792 aaKnown RBP20.52■□□□□ 0.88
STRADB-202ENST00000392249 ARP10275 920 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 HSD17B4P51659 736 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 PPP2R5CQ13362 524 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 MEA1Q16626 185 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 CCDC40Q4G0X9 1142 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 FIGNQ5HY92 759 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 TPH2Q8IWU9 490 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 DYDC2Q96IM9 177 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 ZNF577Q9BSK1 485 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 POLD4Q9HCU8 107 aa20.52■□□□□ 0.88
STRADB-202ENST00000392249 RSPH10B2B2RC85 870 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 EPHB6O15197 1021 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 SLITRK3O94933 977 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 KIF20AO95235 890 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 EYA4O95677 639 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 RSPH10BP0C881 870 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 MTMR2Q13614 643 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 COL20A1Q9P218 1284 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 REXO2Q9Y3B8 237 aaKnown RBP20.51■□□□□ 0.87
STRADB-202ENST00000392249 A0A1W2PQJ5 194 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 FZD9O00144 591 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 ERCC6LQ2NKX8 1250 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 ZNF569Q5MCW4 686 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 CARD6Q9BX69 1037 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
STRADB-202ENST00000392249 HOMER2Q9NSB8 354 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 ZNHIT6Q9NWK9 470 aaKnown RBP20.51■□□□□ 0.87
STRADB-202ENST00000392249 CD2APQ9Y5K6 639 aa20.51■□□□□ 0.87
STRADB-202ENST00000392249 LTBP3Q9NS15 1303 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 FLOT1O75955 427 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 ALAS1P13196 640 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 ARHGAP25P42331 645 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 SETQ01105 290 aaPredicted RBP20.5■□□□□ 0.87
STRADB-202ENST00000392249 CCDC125Q86Z20 511 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 CCDC155Q8N6L0 562 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 ZNF397Q8NF99 534 aaPredicted RBP20.5■□□□□ 0.87
STRADB-202ENST00000392249 CLEC4DQ8WXI8 215 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 CEP63Q96MT8 703 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 BCAS3Q9H6U6 928 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 TUFT1Q9NNX1 390 aa20.5■□□□□ 0.87
STRADB-202ENST00000392249 ZBTB39O15060 712 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 VCAM1P19320 739 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 MAP3K9P80192 1104 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 MNS1Q8NEH6 495 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 UNC45AQ9H3U1 944 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 MRFAP1Q9Y605 127 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 TBCAO75347 108 aaKnown RBP20.49■□□□□ 0.87
STRADB-202ENST00000392249 RINT1Q6NUQ1 792 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 SGIP1Q9BQI5 828 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 MXRA8Q9BRK3 442 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 SLC38A10Q9HBR0 1119 aa20.49■□□□□ 0.87
STRADB-202ENST00000392249 IPO5O00410 1097 aaKnown RBP20.48■□□□□ 0.87
STRADB-202ENST00000392249 MYBP10242 640 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 ITGB5P18084 799 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 ADAM9Q13443 819 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 PRAMEF18Q5VWM3 479 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 IL31RAQ8NI17 732 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 SMCR8Q8TEV9 937 aaPredicted RBP20.48■□□□□ 0.87
STRADB-202ENST00000392249 IQCDQ96DY2 449 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 NHEJ1Q9H9Q4 299 aaPredicted RBP20.48■□□□□ 0.87
STRADB-202ENST00000392249 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 PRPF6O94906 941 aaKnown RBP20.48■□□□□ 0.87
STRADB-202ENST00000392249 MUM1L1Q5H9M0 696 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 SLC35F6Q8N357 371 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 TEKT3Q9BXF9 490 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 WDR11Q9BZH6 1224 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 GINM1Q9NU53 330 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 CGNQ9P2M7 1197 aaKnown RBP20.48■□□□□ 0.87
STRADB-202ENST00000392249 TRIM10Q9UDY6 481 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 FZD1Q9UP38 647 aa20.48■□□□□ 0.87
STRADB-202ENST00000392249 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 SFI1A8K8P3 1242 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 DDX39AO00148 427 aaKnown RBP20.47■□□□□ 0.87
STRADB-202ENST00000392249 HERVK_113P62684 666 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 SPP2Q13103 211 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 EDRF1Q3B7T1 1238 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 EPM2AIP1Q7L775 607 aaPredicted RBP20.47■□□□□ 0.87
STRADB-202ENST00000392249 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 KCTD17Q8N5Z5 321 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 RPAP3Q9H6T3 665 aaPredicted RBP20.47■□□□□ 0.87
STRADB-202ENST00000392249 WRAP73Q9P2S5 460 aaPredicted RBP20.47■□□□□ 0.87
STRADB-202ENST00000392249 PPP1R9AQ9ULJ8 1098 aa20.47■□□□□ 0.87
STRADB-202ENST00000392249 DOCK1Q14185 1865 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms