RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PDXDC1Q6P996 788 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TAB3Q8N5C8 712 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TNFRSF25Q93038 417 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GGT7Q9UJ14 662 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PLAGL2Q9UPG8 496 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 UTP11Q9Y3A2 253 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 KIF13AQ9H1H9 1805 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ANO9A1A5B4 782 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 DAPK3O43293 454 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SERPING1P05155 500 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ANKRD42Q8N9B4 389 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RPL13P26373 211 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 AMPD2Q01433 879 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MESDQ14696 234 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 HAUS3Q68CZ6 603 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 JPH2Q9BR39 696 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CD2APQ9Y5K6 639 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FGGP02679 453 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 B4GALNT4Q76KP1 1039 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GUF1Q8N442 669 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 NT5C3AQ9H0P0 336 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LMTK3Q96Q04 1460 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RAD51CO43502 376 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TTLL1O95922 423 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ACTN3Q08043 901 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MUM1L1Q5H9M0 696 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 OTUD6AQ7L8S5 288 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GLYCTKQ8IVS8 523 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CCDC26Q8TAB7 109 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ELMO3Q96BJ8 720 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 BAIAP2L1Q9UHR4 511 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SALL4Q9UJQ4 1053 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SNX24Q9Y343 169 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RSPH10B2B2RC85 870 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RSPH10BP0C881 870 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RBM26Q5T8P6 1007 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PAPD7Q5XG87 772 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ZMYND12Q9H0C1 365 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 AMFRQ9UKV5 643 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FLT1P17948 1338 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MED1Q15648 1581 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MYO1FO00160 1098 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PDHBP11177 359 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 IRX3P78415 501 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LRRC63Q05C16 580 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SNX1Q13596 522 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PPP1R7Q15435 360 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TRIP13Q15645 432 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CREG2Q8IUH2 290 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CCDC105Q8IYK2 499 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ARFGAP2Q8N6H7 521 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ZNF507Q8TCN5 953 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TBC1D31Q96DN5 1066 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RNPC3Q96LT9 517 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 C7orf25Q9BPX7 421 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FGFBP2Q9BYJ0 223 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TMOD4Q9NZQ9 345 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FRMD4BQ9Y2L6 1034 aa15.72■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CERKLQ49MI3 558 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 WDR93Q6P2C0 686 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GBP6Q6ZN66 633 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CCDC50Q8IVM0 306 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LRRC15Q8TF66 581 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 THOC1Q96FV9 657 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TRIM51Q9BSJ1 452 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 A0A087WUV0 522 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 HARSP12081 509 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GRAPQ13588 217 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PACS2Q86VP3 889 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LMBR1Q8WVP7 490 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PALM3A6NDB9 673 aaPredicted RBP15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CCDC169A6NNP5 214 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SERPINB2P05120 415 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MYL1P05976 194 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ICA1Q05084 483 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PTK2Q05397 1052 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SEPT2Q15019 361 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 QRICH1Q2TAL8 776 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 NBPF9Q3BBW0 867 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CCDC38Q502W7 563 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 NSMFQ6X4W1 530 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 LRRC45Q96CN5 670 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ANO3Q9BYT9 981 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 RIC8AQ9NPQ8 531 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CLRN2A0PK11 232 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 GOLGA8IPA6NC78 632 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms