RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KLRC1P26715 233 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 HOXA10P31260 410 aaPredicted RBP16.02■□□□□ 0.15
MSH5-201ENST00000375703 DNA2P51530 1060 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 USP11P51784 963 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 ALS2CLQ60I27 953 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 LRRC4BQ9NT99 713 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 AIPL1Q9NZN9 384 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 SUGT1Q9Y2Z0 365 aa16.02■□□□□ 0.15
MSH5-201ENST00000375703 A0A087X0T9 212 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 CETN3O15182 167 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 FTCDO95954 541 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 FAM228BP0C875 321 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 SLC20A2Q08357 652 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 SKIDA1Q1XH10 827 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 KIAA0753Q2KHM9 967 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 IFT20Q8IY31 132 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 CRAMP1Q96RY5 1269 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 GLT8D2Q9H1C3 349 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 SHOX2O60902 331 aaPredicted RBP16.01■□□□□ 0.15
MSH5-201ENST00000375703 HSF2BPO75031 334 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 STAT3P40763 770 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 ASIC2Q16515 512 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 TSEN2Q8NCE0 465 aaKnown RBP16.01■□□□□ 0.15
MSH5-201ENST00000375703 CAVIN3Q969G5 261 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 RUFY1Q96T51 708 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 SH3GL2Q99962 352 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 KCNMB3Q9NPA1 279 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 MYO3BQ8WXR4 1341 aa16.01■□□□□ 0.15
MSH5-201ENST00000375703 MED24O75448 989 aa16■□□□□ 0.15
MSH5-201ENST00000375703 HLA-DOAP06340 250 aa16■□□□□ 0.15
MSH5-201ENST00000375703 SCNN1DP51172 638 aa16■□□□□ 0.15
MSH5-201ENST00000375703 PPFIA1Q13136 1202 aa16■□□□□ 0.15
MSH5-201ENST00000375703 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
MSH5-201ENST00000375703 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
MSH5-201ENST00000375703 GLI1P08151 1106 aa16■□□□□ 0.15
MSH5-201ENST00000375703 IRAK1P51617 712 aa16■□□□□ 0.15
MSH5-201ENST00000375703 EDRF1Q3B7T1 1238 aa16■□□□□ 0.15
MSH5-201ENST00000375703 MEI1Q5TIA1 1274 aa16■□□□□ 0.15
MSH5-201ENST00000375703 MXD3Q9BW11 206 aa16■□□□□ 0.15
MSH5-201ENST00000375703 CYP3A7-CYP3A51PA0A087WV96 503 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 SLC26A4O43511 780 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 SLURP2P0DP57 97 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 CYP3A7P24462 503 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 NR2F2P24468 414 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 SLC12A3P55017 1021 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 CDC42EP5Q6NZY7 148 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 ZC3H3Q8IXZ2 948 aaKnown RBP15.99■□□□□ 0.15
MSH5-201ENST00000375703 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 SLFN12Q8IYM2 578 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 PACSIN1Q9BY11 444 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 ANO3Q9BYT9 981 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
MSH5-201ENST00000375703 DHX36Q9H2U1 1008 aaKnown RBP15.99■□□□□ 0.15
MSH5-201ENST00000375703 EPB41L5Q9HCM4 733 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 PCDHGC5Q9Y5F6 944 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 PITPNM2Q9BZ72 1349 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 CARSP49589 748 aaKnown RBP15.99■□□□□ 0.15
MSH5-201ENST00000375703 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 IFT81Q8WYA0 676 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 CAPS2Q9BXY5 557 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 GANQ9H2C0 597 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 GDF3Q9NR23 364 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 USP21Q9UK80 565 aa15.99■□□□□ 0.15
MSH5-201ENST00000375703 PACSIN2Q9UNF0 486 aaPredicted RBP15.99■□□□□ 0.15
MSH5-201ENST00000375703 FRMD3A2A2Y4 597 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 GRID2IPA4D2P6 1211 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 HEXIM1O94992 359 aaKnown RBP15.98■□□□□ 0.15
MSH5-201ENST00000375703 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 RNASE9P60153 205 aaKnown RBP15.98■□□□□ 0.15
MSH5-201ENST00000375703 GUCY2DQ02846 1103 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 NNTQ13423 1086 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 CCDC17Q96LX7 622 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 NFU1Q9UMS0 254 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 PPEF1O14829 653 aaPredicted RBP15.98■□□□□ 0.15
MSH5-201ENST00000375703 EPB41P11171 864 aaKnown RBP15.98■□□□□ 0.15
MSH5-201ENST00000375703 ACTN1P12814 892 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 DNAJC21Q5F1R6 531 aaKnown RBP15.98■□□□□ 0.15
MSH5-201ENST00000375703 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 CATSPER3Q86XQ3 398 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 KRT12Q99456 494 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 DNM3Q9UQ16 869 aa15.98■□□□□ 0.15
MSH5-201ENST00000375703 SLC9A1P19634 815 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 CASP5P51878 434 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 PSMC6P62333 389 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 GIT2Q14161 759 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 ARL8AQ96BM9 186 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 ARMCX3Q9UH62 379 aaPredicted RBP15.97■□□□□ 0.15
MSH5-201ENST00000375703 MEIS1O00470 390 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms