RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 C9orf131Q5VYM1 1079 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 DNAJC19Q96DA6 116 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 HOOK2Q96ED9 719 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 IFIH1Q9BYX4 1025 aaKnown RBP13.51□□□□□ -0.25
UBR4-203ENST00000375225 CEP72Q9P209 647 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 KIAA1024Q9UPX6 916 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 REXO2Q9Y3B8 237 aaKnown RBP13.51□□□□□ -0.25
UBR4-203ENST00000375225 JRKLQ9Y4A0 524 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
UBR4-203ENST00000375225 TARSL2A2RTX5 802 aaKnown RBP13.5□□□□□ -0.25
UBR4-203ENST00000375225 CETN3O15182 167 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
UBR4-203ENST00000375225 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 LCA5LO95447 670 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 EGFRP00533 1210 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 BMP3P12645 472 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 PRLRP16471 622 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 SLC9C1Q4G0N8 1177 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 HERC4Q5GLZ8 1057 aaPredicted RBP13.5□□□□□ -0.25
UBR4-203ENST00000375225 WDR93Q6P2C0 686 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
UBR4-203ENST00000375225 PURBQ96QR8 312 aaKnown RBP13.5□□□□□ -0.25
UBR4-203ENST00000375225 ZSWIM4Q9H7M6 989 aa13.5□□□□□ -0.25
UBR4-203ENST00000375225 F5H6K3 240 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 GH2P01242 217 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 RPL13P26373 211 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 ZNF76P36508 570 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 SREBF1P36956 1147 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 PLA2G4AP47712 749 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 KLRC3Q07444 240 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 SMC1AQ14683 1233 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 RNF10Q8N5U6 811 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 ANKZF1Q9H8Y5 726 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBR4-203ENST00000375225 PPP2R3BQ9Y5P8 575 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 EDIL3O43854 480 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 SERPING1P05155 500 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 TCP1P17987 556 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 MUTP22033 750 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 RPA1P27694 616 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 CIITAP33076 1130 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 KIF11P52732 1056 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 HSP90B2PQ58FF3 399 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 DCAF15Q66K64 600 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 RRAGAQ7L523 313 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 SH2D4AQ9H788 454 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 METTL14Q9HCE5 456 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 ADARB2Q9NS39 739 aaKnown RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
UBR4-203ENST00000375225 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 PCDHA13Q9Y5I0 950 aa13.49□□□□□ -0.25
UBR4-203ENST00000375225 GOLGB1Q14789 3259 aaKnown RBP13.48□□□□□ -0.25
UBR4-203ENST00000375225 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 FRMD3A2A2Y4 597 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 RASSF10A6NK89 507 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
UBR4-203ENST00000375225 DDNO94850 711 aaPredicted RBP13.48□□□□□ -0.25
UBR4-203ENST00000375225 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
UBR4-203ENST00000375225 CYP3A4P08684 503 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 GAP43P17677 238 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 CYP11B2P19099 503 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 MAGEA1P43355 309 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 ITIH3Q06033 890 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 C10orf76Q5T2E6 689 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 ANGEL2Q5VTE6 544 aaKnown RBP13.48□□□□□ -0.25
UBR4-203ENST00000375225 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 STXBP4Q6ZWJ1 553 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 FRMD5Q7Z6J6 570 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 FMNL3Q8IVF7 1028 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 ATRIPQ8WXE1 791 aa13.48□□□□□ -0.25
UBR4-203ENST00000375225 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms