RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MED14O60244 1454 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 THBDP07204 575 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 NCAM1P13591 858 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 PLS3P13797 630 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 CTSWP56202 376 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 FXNQ16595 210 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 LARP1BQ659C4 914 aaKnown RBP6.17□□□□□ -1.42
USP48-202ENST00000374730 ALG3Q92685 438 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 EVC2Q86UK5 1308 aa6.17□□□□□ -1.42
USP48-202ENST00000374730 NKTRP30414 1462 aaKnown RBP6.16□□□□□ -1.42
USP48-202ENST00000374730 SUSD5O60279 629 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 PPP1R11O60927 126 aaPredicted RBP6.16□□□□□ -1.42
USP48-202ENST00000374730 SASH1O94885 1247 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 ZBTB7AO95365 584 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 ASGR2P07307 311 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 ETFBP38117 255 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 LIMS1P48059 325 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 ARID5AQ03989 594 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 IDI1Q13907 227 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 E4F1Q66K89 784 aaPredicted RBP6.16□□□□□ -1.42
USP48-202ENST00000374730 IQCEQ6IPM2 695 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 ZNF227Q86WZ6 799 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 TRMT2AQ8IZ69 625 aaKnown RBP6.16□□□□□ -1.42
USP48-202ENST00000374730 EXOC6Q8TAG9 804 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 NPLOC4Q8TAT6 608 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 PPP1R14AQ96A00 147 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 LUC7LQ9NQ29 371 aaKnown RBP6.16□□□□□ -1.42
USP48-202ENST00000374730 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 CGNL1Q0VF96 1302 aa6.16□□□□□ -1.42
USP48-202ENST00000374730 YTHDC2Q9H6S0 1430 aaKnown RBP6.16□□□□□ -1.42
USP48-202ENST00000374730 NRXN3Q9Y4C0 1643 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 B2RBV5 119 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 SCG5P05408 212 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 ATF2P15336 505 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 HOXC12P31275 282 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 HTRA3P83110 453 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 CYP4F3Q08477 520 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 SLFN5Q08AF3 891 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 MBLAC2Q68D91 279 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 B3GNT8Q7Z7M8 397 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 DCP2Q8IU60 420 aaKnown RBP6.15□□□□□ -1.42
USP48-202ENST00000374730 SLC43A3Q8NBI5 491 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 USP33Q8TEY7 942 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 FRS2Q8WU20 508 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 BTN2A2Q8WVV5 523 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 CPA5Q8WXQ8 436 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 EPN3Q9H201 632 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 ZNF408Q9H9D4 720 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 GPRC5CQ9NQ84 441 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 IGSF5Q9NSI5 407 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 RTEL1Q9NZ71 1219 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 FAN1Q9Y2M0 1017 aa6.15□□□□□ -1.42
USP48-202ENST00000374730 VIRMAQ69YN4 1812 aaKnown RBP6.15□□□□□ -1.43
USP48-202ENST00000374730 ABCC11Q96J66 1382 aa6.15□□□□□ -1.43
USP48-202ENST00000374730 A2ML1A8K2U0 1454 aa6.15□□□□□ -1.43
USP48-202ENST00000374730 COL3A1P02461 1466 aaPredicted RBP6.15□□□□□ -1.43
USP48-202ENST00000374730 CDC42BPGQ6DT37 1551 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 A0A0G2JLL6 359 aaPredicted RBP6.14□□□□□ -1.43
USP48-202ENST00000374730 DDAH1O94760 285 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 ITGAVP06756 1048 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 PMLP29590 882 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 FOXO4P98177 505 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 KCNAB2Q13303 367 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 TESK1Q15569 626 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 SV2CQ496J9 727 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 ACBD5Q5T8D3 534 aaPredicted RBP6.14□□□□□ -1.43
USP48-202ENST00000374730 MRM1Q6IN84 353 aaKnown RBP6.14□□□□□ -1.43
USP48-202ENST00000374730 MCF2L2Q86YR7 1114 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.14□□□□□ -1.43
USP48-202ENST00000374730 PLEKHO2Q8TD55 490 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 FNIP1Q8TF40 1166 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 CCDC140Q96MF4 163 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 XYLT2Q9H1B5 865 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 PMF1-BGLAPU3KQ54 211 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 NLRP1Q9C000 1473 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 CD163L1Q9NR16 1453 aa6.14□□□□□ -1.43
USP48-202ENST00000374730 TCERG1O14776 1098 aaKnown RBP6.13□□□□□ -1.43
USP48-202ENST00000374730 FFAR3O14843 346 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 CPP00450 1065 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
USP48-202ENST00000374730 FUCA1P04066 466 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 GTF2A2P52657 109 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 VWA3BQ502W6 1294 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 EEPD1Q7L9B9 569 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 MORC1Q86VD1 984 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 Q8N1Y9 231 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 TP53I13Q8NBR0 393 aaPredicted RBP6.13□□□□□ -1.43
USP48-202ENST00000374730 DPF3Q92784 378 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 GMLQ99445 158 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 LGR4Q9BXB1 951 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 SLC12A5Q9H2X9 1139 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 RXFP1Q9HBX9 757 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 MARCH2Q9P0N8 246 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 LRP2BPQ9P2M1 347 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 A0A1W2PP64 1363 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 ATP7BP35670 1465 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 MON2Q7Z3U7 1717 aa6.13□□□□□ -1.43
USP48-202ENST00000374730 NCANO14594 1321 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms