RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KCNQ4P56696 695 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 BPIFB4P59827 614 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 RASA3Q14644 834 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 C1orf141Q5JVX7 400 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 GALNT17Q6IS24 598 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 MICU3Q86XE3 530 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 KLHL7Q8IXQ5 586 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 RETREG2Q8NC44 543 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 IQSEC3Q9UPP2 1182 aaPredicted RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 GRID2IPA4D2P6 1211 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 CCNB1P14635 433 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 PIP4K2AP48426 406 aaPredicted RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 MPP3Q13368 585 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 CUL1Q13616 776 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 ZNF658Q5TYW1 1059 aaPredicted RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 CCNJLQ8IV13 435 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 USP38Q8NB14 1042 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 ASAP3Q8TDY4 903 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 MYL10Q9BUA6 226 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 KRT23Q9C075 422 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 FOXP1Q9H334 677 aaPredicted RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 CD2APQ9Y5K6 639 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 MAFGO15525 162 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 FLOT1O75955 427 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 EEF1GP26641 437 aaKnown RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 PTDSS1P48651 473 aaKnown RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 NCSTNQ92542 709 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 SLC35B4Q969S0 331 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 LZTS2Q9BRK4 669 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 LGR6Q9HBX8 967 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 INCENPQ9NQS7 918 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 WNT7AO00755 349 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SPATA31D3P0C874 917 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 RPL13P26373 211 aaKnown RBP10.42□□□□□ -0.74
SF3A3-201ENST00000373019 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
SF3A3-201ENST00000373019 DNA2P51530 1060 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 RASSF7Q02833 373 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SPATA31D4Q6ZUB0 917 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 LCA5Q86VQ0 697 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SLC26A6Q9BXS9 759 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 PACSIN2Q9UNF0 486 aaPredicted RBP10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SPATA31A5Q5VU36 1347 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SPATA31A7Q8IWB4 1347 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 PCDH11XQ9BZA7 1347 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.742e-7■■■□□ 15.7
SF3A3-201ENST00000373019 PDXDC2PQ6P474 469 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 KRT27Q7Z3Y8 459 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SUPT20HQ8NEM7 779 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 PTPRN2Q92932 1015 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 EPB41L4BQ9H329 900 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 EXOC1Q9NV70 894 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 CYP39A1Q9NYL5 469 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 A0A1W2PQJ5 194 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 EPHB6O15197 1021 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 DIXDC1Q155Q3 683 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 ZC2HC1CQ53FD0 456 aaPredicted RBP10.42□□□□□ -0.74
SF3A3-201ENST00000373019 IRGCQ6NXR0 463 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 DEFB132Q7Z7B7 95 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 ENDOVQ8N8Q3 282 aaKnown RBP10.42□□□□□ -0.74
SF3A3-201ENST00000373019 DNAJC9Q8WXX5 260 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 EEF2KMTQ96G04 330 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 CABP5Q9NP86 173 aa10.42□□□□□ -0.74
SF3A3-201ENST00000373019 SPATA31A1Q5TZJ5 1347 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 PRAMEF22A3QJZ6 481 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 EIF4BP23588 611 aaKnown RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 SETDB1Q15047 1291 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 ASTE1Q2TB18 679 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 RALYLQ86SE5 291 aaKnown RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 C2CD5Q86YS7 1000 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 ADSSL1Q8N142 457 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 USP15Q9Y4E8 981 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 FTCDO95954 541 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 CYP1A1P04798 512 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 GBP1P32455 592 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 DEUP1Q05D60 604 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 FIGNQ5HY92 759 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 EARS2Q5JPH6 523 aaKnown RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 MIIPQ5JXC2 388 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 SFMBT2Q5VUG0 894 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 SESTD1Q86VW0 696 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 GPIHBP1Q8IV16 184 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 GBP7Q8N8V2 638 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 TBC1D16Q8TBP0 767 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 MIPOL1Q8TD10 442 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 PIGOQ8TEQ8 1089 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 CCDC97Q96F63 343 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 NOX5Q96PH1 765 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 TXLNGYQ9BZA5 131 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 VCXQ9H320 206 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 CTNNAL1Q9UBT7 734 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 RGS17Q9UGC6 210 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 LNPEPQ9UIQ6 1025 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms