RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-202ENST00000371820 RAB30Q15771 203 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 DGKDQ16760 1214 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 RTN1Q16799 776 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 LY6KQ17RY6 165 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 FAM47CQ5HY64 1035 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 XRRA1Q6P2D8 792 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 DHX37Q8IY37 1157 aaKnown RBP11.75□□□□□ -0.53
COL5A1-202ENST00000371820 ZNF713Q8N859 430 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-202ENST00000371820 MYRIPQ8NFW9 859 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 LEO1Q8WVC0 666 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-202ENST00000371820 AGXT2Q9BYV1 514 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 SCN10AQ9Y5Y9 1956 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 KLF18A0A0U1RQI7 1052 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 GOLGA6L19H0YKK7 550 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 FGBP02675 491 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL5A1-202ENST00000371820 CCL23P55773 120 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 FOXD4L6Q3SYB3 417 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-202ENST00000371820 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 FOXD4L3Q6VB84 417 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-202ENST00000371820 Q6ZUG5 572 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 VWCEQ96DN2 955 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 GAS2L1Q99501 681 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-202ENST00000371820 PRDM12Q9H4Q4 367 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 NAP1L2Q9ULW6 460 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-202ENST00000371820 NOD1Q9Y239 953 aa11.74□□□□□ -0.53
COL5A1-202ENST00000371820 UQCRHLA0A096LP55 91 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 LARGE1O95461 756 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 UQCRHP07919 91 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 ICAM3P32942 547 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 EVCP57679 992 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 TYRO3Q06418 890 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 NEDD9Q14511 834 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 PCNX4Q63HM2 1172 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 CCDC73Q6ZRK6 1079 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 OTOP2Q7RTS6 562 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 HEATR3Q7Z4Q2 680 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 NLRX1Q86UT6 975 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 RAB11FIP4Q86YS3 637 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
COL5A1-202ENST00000371820 CMTR1Q8N1G2 835 aaKnown RBP11.73□□□□□ -0.53
COL5A1-202ENST00000371820 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 BICD2Q8TD16 824 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 CDHR1Q96JP9 859 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 TANC1Q9C0D5 1861 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
COL5A1-202ENST00000371820 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
COL5A1-202ENST00000371820 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
COL5A1-202ENST00000371820 NOP56O00567 594 aaKnown RBP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 NRDCO43847 1150 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 PPFIA4O75335 1185 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 GGPS1O95749 300 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 PFKMP08237 780 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 CPA1P15085 419 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 METAP2P50579 478 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 TPM4P67936 248 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 BFSP2Q13515 415 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 SYCP1Q15431 976 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 CELF3Q5SZQ8 465 aaKnown RBP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 GIMAP8Q8ND71 665 aaPredicted RBP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 SYMPKQ92797 1274 aaKnown RBP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 SCLYQ96I15 445 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 SPATA33Q96N06 139 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
COL5A1-202ENST00000371820 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 PAXBP1Q9Y5B6 917 aa11.72□□□□□ -0.53
COL5A1-202ENST00000371820 NID2Q14112 1375 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 KIF2AO00139 706 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 MEIS2O14770 477 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 F2P00734 622 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 CYP2C9P11712 490 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 HOXD8P13378 290 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 RFC2P35250 354 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms