RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 LRRC43Q8N309 656 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 TGFBRAP1Q8WUH2 860 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 BRF1Q92994 677 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 EXOC4Q96A65 974 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 ALPK1Q96QP1 1244 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 LY9Q9HBG7 655 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 USP40Q9NVE5 1235 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 SCHIP1Q9P0W5 487 aaPredicted RBP8.28□□□□□ -1.08
BRCC3-203ENST00000369459 ZSWIM5Q9P217 1185 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 JAG2Q9Y219 1238 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 GNEQ9Y223 722 aaKnown RBP8.28□□□□□ -1.08
BRCC3-203ENST00000369459 BCS1LQ9Y276 419 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 SCN4AP35499 1836 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 STK36Q9NRP7 1315 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 MINDY4BA8MYZ0 360 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 PSMD14O00487 310 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
BRCC3-203ENST00000369459 DDAH1O94760 285 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 POLR3DP05423 398 aaPredicted RBP8.28□□□□□ -1.08
BRCC3-203ENST00000369459 HLA-DOAP06340 250 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 CPA1P15085 419 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 PDIA3P30101 505 aaKnown RBP8.28□□□□□ -1.08
BRCC3-203ENST00000369459 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
BRCC3-203ENST00000369459 GABPAQ06546 454 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 CRYMQ14894 314 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 SEC23AQ15436 765 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 CCDC122Q5T0U0 273 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 PPP4R4Q6NUP7 873 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 DGKHQ86XP1 1220 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 FAM81AQ8TBF8 368 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 GLMNQ92990 594 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 TCF7L2Q9NQB0 619 aa8.28□□□□□ -1.08
BRCC3-203ENST00000369459 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 RTN2O75298 545 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 SLC4A1P02730 911 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 CXCL9Q07325 125 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 BNIP1Q12981 228 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 ZBTB17Q13105 803 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 TMEM67Q5HYA8 995 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 IFFO2Q5TF58 517 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 CAPRIN2Q6IMN6 1127 aaKnown RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 FAM83AQ86UY5 434 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 FOXP4Q8IVH2 680 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 SMYD1Q8NB12 490 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 KIF18AQ8NI77 898 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 MIPOL1Q8TD10 442 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 CCDC17Q96LX7 622 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 ZSCAN10Q96SZ4 725 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 UBAC1Q9BSL1 405 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 PIH1D1Q9NWS0 290 aaKnown RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 TMOD2Q9NZR1 351 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 TIMM22Q9Y584 194 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 IFIT3O14879 490 aaKnown RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 ZNF254O75437 659 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 MYL3P08590 195 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 PRLRP16471 622 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 ATF7P17544 494 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 VAMP1P23763 118 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 CFAP100Q494V2 611 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 ERAP2Q6P179 960 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 TAOK1Q7L7X3 1001 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 GBP7Q8N8V2 638 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 CTNNBL1Q8WYA6 563 aaPredicted RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 SYNCQ9H7C4 482 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 WDR37Q9Y2I8 494 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 LUC7L2Q9Y383 392 aaKnown RBP8.27□□□□□ -1.09
BRCC3-203ENST00000369459 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
BRCC3-203ENST00000369459 CCDC69A6NI79 296 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 GOLGA6L19H0YKK7 550 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 M0QX08 132 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 BIN1O00499 593 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 NDUFB5O43674 189 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 OPA1O60313 960 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 LARGE1O95461 756 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 ENDOUP21128 410 aaKnown RBP8.26□□□□□ -1.09
BRCC3-203ENST00000369459 HSD3B2P26439 372 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
BRCC3-203ENST00000369459 ST3GAL1Q11201 340 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 SPDYE2Q495Y8 402 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 APOA5Q6Q788 366 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 NANOGNBQ7Z5D8 188 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 BPHLQ86WA6 291 aaPredicted RBP8.26□□□□□ -1.09
BRCC3-203ENST00000369459 ZNF280CQ8ND82 737 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 NLGN2Q8NFZ4 835 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 NEDD1Q8NHV4 660 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 CEP295NLQ96MC4 621 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.26□□□□□ -1.09
BRCC3-203ENST00000369459 RIMKLBQ9ULI2 386 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 GOLGA6L10A0A0M3HER8 536 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 KLF18A0A0U1RQI7 1052 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 CPLX1O14810 134 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 PCNAP12004 261 aa8.26□□□□□ -1.09
BRCC3-203ENST00000369459 SCNN1BP51168 640 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms