RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MUM1L1Q5H9M0 696 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 NAA15Q9BXJ9 866 aaKnown RBP20.65■□□□□ 0.9
HOXA9-201ENST00000343483 CGNQ9P2M7 1197 aaKnown RBP20.65■□□□□ 0.9
HOXA9-201ENST00000343483 ZBED4O75132 1171 aa20.64■□□□□ 0.89
HOXA9-201ENST00000343483 CTTNQ14247 550 aaKnown RBP20.64■□□□□ 0.89
HOXA9-201ENST00000343483 SYT2Q8N9I0 419 aaPredicted RBP20.64■□□□□ 0.89
HOXA9-201ENST00000343483 ZNF507Q8TCN5 953 aa20.64■□□□□ 0.89
HOXA9-201ENST00000343483 TSG101Q99816 390 aa20.64■□□□□ 0.89
HOXA9-201ENST00000343483 DESI2Q9BSY9 194 aa20.64■□□□□ 0.89
HOXA9-201ENST00000343483 FGFBP2Q9BYJ0 223 aa20.64■□□□□ 0.89
HOXA9-201ENST00000343483 BHMT2Q9H2M3 363 aa20.64■□□□□ 0.89
HOXA9-201ENST00000343483 SOWAHDA6NJG2 315 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 DNM2P50570 870 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 HMGCS2P54868 508 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 PPP2R5CQ13362 524 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 NOC4LQ9BVI4 516 aaKnown RBP20.63■□□□□ 0.89
HOXA9-201ENST00000343483 PITPNM2Q9BZ72 1349 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 A0A1W2PQC6 194 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 POTEJP0CG39 1038 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 PRKG1Q13976 671 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 MTF1Q14872 753 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 ATG4CQ96DT6 458 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 CCDC51Q96ER9 411 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 MXRA8Q9BRK3 442 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 RABGAP1Q9Y3P9 1069 aa20.63■□□□□ 0.89
HOXA9-201ENST00000343483 RNF225M0QZC1 329 aaPredicted RBP20.62■□□□□ 0.89
HOXA9-201ENST00000343483 IPO5O00410 1097 aaKnown RBP20.62■□□□□ 0.89
HOXA9-201ENST00000343483 VWA5AO00534 786 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 FGFR1OPO95684 399 aaKnown RBP20.62■□□□□ 0.89
HOXA9-201ENST00000343483 ITGB5P18084 799 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 GIT2Q14161 759 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 IL31RAQ8NI17 732 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 DYDC2Q96IM9 177 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 WNK4Q96J92 1243 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 HSD17B14Q9BPX1 270 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 REEP2Q9BRK0 252 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 ABHD10Q9NUJ1 306 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 PCDHA2Q9Y5H9 948 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 DOCK1Q14185 1865 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 RPTORQ8N122 1335 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 FRMD3A2A2Y4 597 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 TBC1D8BQ0IIM8 1120 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 ELF2Q15723 593 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 KRT26Q7Z3Y9 468 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 NELFCDQ8IXH7 590 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 PIGOQ8TEQ8 1089 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 KLRG1Q96E93 195 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 WDR11Q9BZH6 1224 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 TUFT1Q9NNX1 390 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 PKD2L1Q9P0L9 805 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
HOXA9-201ENST00000343483 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 NKRFO15226 690 aaKnown RBP eCLIP20.61■□□□□ 0.89
HOXA9-201ENST00000343483 FANCGO15287 622 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 CCDC175P0C221 793 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 GNG11P61952 73 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 MIIPQ5JXC2 388 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 SYTL5Q8TDW5 730 aaPredicted RBP20.61■□□□□ 0.89
HOXA9-201ENST00000343483 TRERF1Q96PN7 1200 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 TEKT3Q9BXF9 490 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 UNC45AQ9H3U1 944 aa20.61■□□□□ 0.89
HOXA9-201ENST00000343483 URI1O94763 535 aaPredicted RBP20.6■□□□□ 0.89
HOXA9-201ENST00000343483 SLITRK3O94933 977 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 EYA4O95677 639 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 KRT9P35527 623 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 RPS6P62753 249 aaKnown RBP20.6■□□□□ 0.89
HOXA9-201ENST00000343483 RAD9BQ6WBX8 426 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 LRRC55Q6ZSA7 311 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 RUSC1Q9BVN2 902 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 SSC5DA1L4H1 1573 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 DDX39AO00148 427 aaKnown RBP20.6■□□□□ 0.89
HOXA9-201ENST00000343483 EIF2AK2P19525 551 aaKnown RBP20.6■□□□□ 0.89
HOXA9-201ENST00000343483 CASQ1P31415 396 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 GHRHRQ02643 423 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 NSMFQ6X4W1 530 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 SCFD1Q8WVM8 642 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 KCNH7Q9NS40 1196 aa20.6■□□□□ 0.89
HOXA9-201ENST00000343483 TTC26A0AVF1 554 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 KIF20AO95235 890 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 ERCC3P19447 782 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 ZCWPW2Q504Y3 356 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 FKBP15Q5T1M5 1219 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 SFR1Q86XK3 245 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 LRRN4CLQ8ND94 238 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
HOXA9-201ENST00000343483 MRPL44Q9H9J2 332 aaKnown RBP20.59■□□□□ 0.89
HOXA9-201ENST00000343483 PNMA2Q9UL42 364 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 CEP350Q5VT06 3117 aa20.59■□□□□ 0.89
HOXA9-201ENST00000343483 TRAF5O00463 557 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 TBCAO75347 108 aaKnown RBP20.58■□□□□ 0.89
HOXA9-201ENST00000343483 FDX1P10109 184 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 TRIM21P19474 475 aaKnown RBP20.58■□□□□ 0.89
HOXA9-201ENST00000343483 FKBP3Q00688 224 aaKnown RBP20.58■□□□□ 0.89
HOXA9-201ENST00000343483 PCNX4Q63HM2 1172 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 RNF207Q6ZRF8 634 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 KCTD17Q8N5Z5 321 aa20.58■□□□□ 0.89
HOXA9-201ENST00000343483 ZNF397Q8NF99 534 aaPredicted RBP20.58■□□□□ 0.89
HOXA9-201ENST00000343483 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms