RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 GOLGA8TH3BQL2 631 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TOM1L1O75674 476 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 CPP00450 1065 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 S100A6P06703 90 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 GOLGA8HP0CJ92 632 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 RASGRF1Q13972 1273 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 MORC3Q14149 939 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 RCN1Q15293 331 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 KRT74Q7RTS7 529 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TPCN1Q9ULQ1 816 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SBNO1A3KN83 1393 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 HEXIM1O94992 359 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 HLA-DOAP06340 250 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 STAT1P42224 750 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ADRM1Q16186 407 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 OTUD6AQ7L8S5 288 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 GPR141Q7Z602 305 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ZFRQ96KR1 1074 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 THUMPD2Q9BTF0 503 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 MID2Q9UJV3 735 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 HSPA6P17066 643 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 NUP107P57740 925 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PUDPQ08623 228 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 POTEEQ6S8J3 1075 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PROCA1Q8NCQ7 364 aaPredicted RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 RSPH1Q8WYR4 309 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 CCT7Q99832 543 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SERPINB13Q9UIV8 391 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PLAAQ9Y263 795 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PLS3P13797 630 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 GSTO1P78417 241 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 KIF19Q2TAC6 998 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SYCP2LQ5T4T6 812 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PBXIP1Q96AQ6 731 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PARD6BQ9BYG5 372 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 BSDC1Q9NW68 430 aaPredicted RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.62□□□□□ -1.35
VCAN-203ENST00000343200 POC1B-GALNT4F8VUJ3 575 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 SGK1O00141 431 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 PPP2R2AP63151 447 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 MRPL44Q9H9J2 332 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 LMBRD1Q9NUN5 540 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 DLGAP2Q9P1A6 1054 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 LAMA4Q16363 1823 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 KPNA4O00629 521 aaPredicted RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 SASH1O94885 1247 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 OCM2P0CE71 109 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 OCMP0CE72 109 aaPredicted RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 YWHAGP61981 247 aaKnown RBP eCLIP6.61□□□□□ -1.35
VCAN-203ENST00000343200 OLR1P78380 273 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 IQCB1Q15051 598 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 TRIM45Q9H8W5 580 aaPredicted RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 KIAA1468Q9P260 1216 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 IPPQ9Y573 584 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 ASAP2O43150 1006 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 HIC1Q14526 733 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 RETREG2Q8NC44 543 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 EME1Q96AY2 570 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 TBK1Q9UHD2 729 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 IL16Q14005 1332 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 CLK1P49759 484 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 DR1Q01658 176 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 SCRN3Q0VDG4 424 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 INPP5AQ14642 412 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 LRRC8EQ6NSJ5 796 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 SFR1Q86XK3 245 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 SIX5Q8N196 739 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 GLT8D2Q9H1C3 349 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 FAM207AQ9NSI2 230 aaPredicted RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 USE1Q9NZ43 259 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 STX8Q9UNK0 236 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 B4DLN1 442 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 CFAP99D6REC4 459 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 MAGEA1P43355 309 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 MRPL12P52815 198 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 CORO7P57737 925 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 RBM6P78332 1123 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 NEK8Q86SG6 692 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 RNASE11Q8TAA1 199 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 RPS6KC1Q96S38 1066 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 PPARGC1AQ9UBK2 798 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 NR1I2O75469 434 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 ECEL1O95672 775 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 CAV1Q03135 178 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 TBCCQ15814 346 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 NLRP14Q86W24 1093 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 PASD1Q8IV76 773 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 DENND6AQ8IWF6 608 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 TDRD7Q8NHU6 1098 aaKnown RBP6.61□□□□□ -1.35
VCAN-203ENST00000343200 APOL4Q9BPW4 351 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 ANAPC5Q9UJX4 755 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 FAM95CA0A1B0GW59 222 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 PTPDC1A2A3K4 754 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 H7C0S8 307 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 IMPDH2P12268 514 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 SGSM1Q2NKQ1 1148 aa6.61□□□□□ -1.35
VCAN-203ENST00000343200 RNF34Q969K3 372 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms