RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 VWA3BQ502W6 1294 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 CCDC70Q6NSX1 233 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 SLF2Q8IX21 1173 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
SEC24A-201ENST00000322887 BAP1Q92560 729 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 NSUN4Q96CB9 384 aaKnown RBP13.4□□□□□ -0.26
SEC24A-201ENST00000322887 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 KCNQ5Q9NR82 932 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
SEC24A-201ENST00000322887 STX8Q9UNK0 236 aa13.4□□□□□ -0.26
SEC24A-201ENST00000322887 MEFVO15553 781 aaPredicted RBP13.4□□□□□ -0.27
SEC24A-201ENST00000322887 MAP2K2P36507 400 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 KCNMA1Q12791 1236 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 HLTFQ14527 1009 aaKnown RBP eCLIP13.4□□□□□ -0.27
SEC24A-201ENST00000322887 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 IQCKQ8N0W5 287 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 CNPY4Q8N129 248 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 GPC2Q8N158 579 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 PNMA1Q8ND90 353 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 RNF181Q9P0P0 153 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 SAP30BPQ9UHR5 308 aaKnown RBP13.4□□□□□ -0.27
SEC24A-201ENST00000322887 ANAPC4Q9UJX5 808 aa13.4□□□□□ -0.27
SEC24A-201ENST00000322887 OPA1O60313 960 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 SCP2P22307 547 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 E2F5Q15329 346 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 PTGISQ16647 500 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 NLRP14Q86W24 1093 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 MYCBPAPQ8TBZ2 947 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 COPB2P35606 906 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 NBPF9Q3BBW0 867 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 HHIPL2Q6UWX4 724 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 TBC1D5Q92609 795 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
SEC24A-201ENST00000322887 ADAMTS1Q9UHI8 967 aa13.39□□□□□ -0.27
SEC24A-201ENST00000322887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEC24A-201ENST00000322887 M0R2N6 131 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 DDAH1O94760 285 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 LDHCP07864 332 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ACTN1P12814 892 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 SKOR1P84550 965 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 KCNB1Q14721 858 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 GRIK5Q16478 980 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 UBAP2Q5T6F2 1119 aaKnown RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ADAT2Q7Z6V5 191 aaKnown RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 MAD2L2Q9UI95 211 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 A0A087X0T9 212 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 DNM1LO00429 736 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 RAD17O75943 681 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 FAM228BP0C875 321 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ECM1Q16610 540 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 DHTKD1Q96HY7 919 aaPredicted RBP13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ALS2CR12Q96Q35 445 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 EPN3Q9H201 632 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 HAUS2Q9NVX0 235 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 GAKO14976 1311 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
SEC24A-201ENST00000322887 PPP1R37O75864 691 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 ITGA4P13612 1032 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
SEC24A-201ENST00000322887 EMBQ6PCB8 327 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 USP17L2Q6R6M4 530 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 ZSCAN29Q8IWY8 852 aaPredicted RBP13.37□□□□□ -0.27
SEC24A-201ENST00000322887 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
SEC24A-201ENST00000322887 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 PHF20L1A8MW92 1017 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 STXBP3O00186 592 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 RCAN1P53805 252 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
SEC24A-201ENST00000322887 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 CABS1Q96KC9 395 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
SEC24A-201ENST00000322887 CELF4Q9BZC1 486 aaKnown RBP13.37□□□□□ -0.27
SEC24A-201ENST00000322887 KCNK3O14649 394 aa13.36□□□□□ -0.27
SEC24A-201ENST00000322887 SLC37A4O43826 429 aa13.36□□□□□ -0.27
SEC24A-201ENST00000322887 NOL4O94818 638 aa13.36□□□□□ -0.27
SEC24A-201ENST00000322887 TCP1P17987 556 aaKnown RBP13.36□□□□□ -0.27
SEC24A-201ENST00000322887 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
SEC24A-201ENST00000322887 ZNF280AP59817 542 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms