RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 CTAGE9A4FU28 777 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 FAM155AB1AL88 458 aaPredicted RBP15.75■□□□□ 0.11
VRK3-201ENST00000316763 FDX1P10109 184 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 TUBB4BP68371 445 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 HTRA3P83110 453 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 SNAPC2Q13487 334 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 DEFB115Q30KQ5 88 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 RETREG2Q8NC44 543 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 CRYGNQ8WXF5 182 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
VRK3-201ENST00000316763 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
VRK3-201ENST00000316763 DUSP9Q99956 384 aaKnown RBP15.75■□□□□ 0.11
VRK3-201ENST00000316763 TUBGCP2Q9BSJ2 902 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 TMOD4Q9NZQ9 345 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 MRPL11Q9Y3B7 192 aaKnown RBP15.75■□□□□ 0.11
VRK3-201ENST00000316763 ABCB11O95342 1321 aa15.75■□□□□ 0.11
VRK3-201ENST00000316763 RASSF10A6NK89 507 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 FGFR1OPO95684 399 aaKnown RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 FOSP01100 380 aaPredicted RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 GTF2A2P52657 109 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 MOGSQ13724 837 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 KRT79Q5XKE5 535 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 PPP4R3AQ6IN85 833 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 CEP112Q8N8E3 955 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 ACRBPQ8NEB7 543 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 RABGGTAQ92696 567 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 DNAJC7Q99615 494 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 PRDM10Q9NQV6 1147 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 FAM53CQ9NYF3 392 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 ADAMTS5Q9UNA0 930 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 LOC285556D6RIA3 1793 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 TTC26A0AVF1 554 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 C1QTNF8P60827 252 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 GABPB1Q06547 395 aaPredicted RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 STK4Q13043 487 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 TEX35Q5T0J7 233 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 ANKRD40Q6AI12 368 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 CATSPERGQ6ZRH7 1159 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 UNC13DQ70J99 1090 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 RSRC2Q7L4I2 434 aaKnown RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 LARP4BQ92615 738 aaKnown RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 IQCDQ96DY2 449 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 CDC23Q9UJX2 597 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 PNMA2Q9UL42 364 aa15.74■□□□□ 0.11
VRK3-201ENST00000316763 EPN1Q9Y6I3 576 aaPredicted RBP15.74■□□□□ 0.11
VRK3-201ENST00000316763 RNF225M0QZC1 329 aaPredicted RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 VWA5AO00534 786 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 GCFC2P16383 781 aaKnown RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 ZSCAN20P17040 1043 aaPredicted RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 USP11P51784 963 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 TBC1D8BQ0IIM8 1120 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 GRM1Q13255 1194 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 GRB10Q13322 594 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 UTP14CQ5TAP6 766 aaKnown RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 CNOT6LQ96LI5 555 aaKnown RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 AGBL1Q96MI9 1066 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 NAPGQ99747 312 aaPredicted RBP15.73■□□□□ 0.11
VRK3-201ENST00000316763 ZNF446Q9NWS9 450 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 CCPG1Q9ULG6 757 aa15.73■□□□□ 0.11
VRK3-201ENST00000316763 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 B4DLN1 442 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 ATP8B1O43520 1251 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 MARCH6O60337 910 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 NDUFA10O95299 355 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 TDP2O95551 362 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 CETPP11597 493 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 DSG3P32926 999 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 DMTNQ08495 405 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 COG2Q14746 738 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 CCL15Q16663 113 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 FKBP15Q5T1M5 1219 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
VRK3-201ENST00000316763 SRGAP1Q7Z6B7 1085 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 PROCA1Q8NCQ7 364 aaPredicted RBP15.72■□□□□ 0.11
VRK3-201ENST00000316763 REPS2Q8NFH8 660 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
VRK3-201ENST00000316763 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 MYPNQ86TC9 1320 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 CYP3A7-CYP3A51PA0A087WV96 503 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 SLC37A4O43826 429 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 ZBED4O75132 1171 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 FCER1AP12319 257 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
VRK3-201ENST00000316763 CYP3A7P24462 503 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 SREBF1P36956 1147 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 KRT83P78385 493 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 GHRHRQ02643 423 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 PSMD2Q13200 908 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 MCM6Q14566 821 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 GPAT2Q6NUI2 795 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms