RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 LRRC41Q15345 812 aa15.42■□□□□ 0.06
VAMP2-201ENST00000316509 SCFD1Q8WVM8 642 aa15.42■□□□□ 0.06
VAMP2-201ENST00000316509 TSC1Q92574 1164 aa15.42■□□□□ 0.06
VAMP2-201ENST00000316509 TBC1D5Q92609 795 aa15.42■□□□□ 0.06
VAMP2-201ENST00000316509 SEL1LQ9UBV2 794 aa15.42■□□□□ 0.06
VAMP2-201ENST00000316509 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
VAMP2-201ENST00000316509 ZNF112Q9UJU3 913 aa15.42■□□□□ 0.06
VAMP2-201ENST00000316509 EFCAB8A8MWE9 144 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 EIF3CLB5ME19 914 aaKnown RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 SLITRK3O94933 977 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 GMPSP49915 693 aaPredicted RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 ZYXQ15942 572 aaKnown RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 B3GNT9Q6UX72 402 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 EPM2AIP1Q7L775 607 aaPredicted RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 MNS1Q8NEH6 495 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 CYP2W1Q8TAV3 490 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 EIF3CQ99613 913 aaKnown RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 ZNF577Q9BSK1 485 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 SLC38A10Q9HBR0 1119 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 OLFML3Q9NRN5 406 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 ZNF536O15090 1300 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 ZBED4O75132 1171 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 PABPC4Q13310 644 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■■■ 52.2
VAMP2-201ENST00000316509 KNOP1Q1ED39 458 aaKnown RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 CCDC40Q4G0X9 1142 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 WDR59Q6PJI9 974 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 APOBEC3FQ8IUX4 373 aaKnown RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 MICALL2Q8IY33 904 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 WDR24Q96S15 920 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 CHP1Q99653 195 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
VAMP2-201ENST00000316509 FBXO28Q9NVF7 368 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 PLAGL2Q9UPG8 496 aa15.41■□□□□ 0.06
VAMP2-201ENST00000316509 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
VAMP2-201ENST00000316509 EML1O00423 815 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 EIF3DO15371 548 aaKnown RBP eCLIP15.4■□□□□ 0.06
VAMP2-201ENST00000316509 TBCAO75347 108 aaKnown RBP15.4■□□□□ 0.06
VAMP2-201ENST00000316509 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
VAMP2-201ENST00000316509 PSMC6P62333 389 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 NFIL3Q16649 462 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 STXBP4Q6ZWJ1 553 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 TXLNBQ8N3L3 684 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 CLEC4DQ8WXI8 215 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 SYN2Q92777 582 aaPredicted RBP15.4■□□□□ 0.06
VAMP2-201ENST00000316509 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 LZTFL1Q9NQ48 299 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 PPP2R3BQ9Y5P8 575 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 MRFAP1Q9Y605 127 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 UBE4BO95155 1302 aa15.4■□□□□ 0.06
VAMP2-201ENST00000316509 ADAM9Q13443 819 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 RINT1Q6NUQ1 792 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 XRRA1Q6P2D8 792 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 TRIM59Q8IWR1 403 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 BHMT2Q9H2M3 363 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
VAMP2-201ENST00000316509 HACL1Q9UJ83 578 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 ODF2LQ9ULJ1 636 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 BCS1LQ9Y276 419 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 CTDP1Q9Y5B0 961 aaPredicted RBP15.39■□□□□ 0.05
VAMP2-201ENST00000316509 FRMPD4Q14CM0 1322 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 NPHP3-ACAD11A0A0J9YXS1 232 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 CTAGE9A4FU28 777 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 PCNX4Q63HM2 1172 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 SCYL3Q8IZE3 742 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 NEK11Q8NG66 645 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 UBXN4Q92575 508 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 AGPAT5Q9NUQ2 364 aa15.39■□□□□ 0.05
VAMP2-201ENST00000316509 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
VAMP2-201ENST00000316509 ARHGAP25P42331 645 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 C1orf186Q6ZWK4 172 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 ILDR2Q71H61 639 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 CEP112Q8N8E3 955 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 GLIS3Q8NEA6 775 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 ACRBPQ8NEB7 543 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 DYDC2Q96IM9 177 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 AGBL1Q96MI9 1066 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 TSGA10Q9BZW7 698 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 NHEJ1Q9H9Q4 299 aaPredicted RBP15.38■□□□□ 0.05
VAMP2-201ENST00000316509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.05
VAMP2-201ENST00000316509 UBIAD1Q9Y5Z9 338 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 C19orf81C9J6K1 198 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 IPO5O00410 1097 aaKnown RBP15.38■□□□□ 0.05
VAMP2-201ENST00000316509 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
VAMP2-201ENST00000316509 KRT86O43790 486 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 TAL1P17542 331 aaPredicted RBP15.38■□□□□ 0.05
VAMP2-201ENST00000316509 OAZ1P54368 228 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 ZNF569Q5MCW4 686 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 SFR1Q86XK3 245 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 TPH2Q8IWU9 490 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 C12orf42Q96LP6 360 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 ZHX3Q9H4I2 956 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 MMRN2Q9H8L6 949 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
VAMP2-201ENST00000316509 TBC1D22BQ9NU19 505 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms