RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 RGS12O14924 1447 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 HNRNPCL2B2RXH8 293 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 TOM1O60784 492 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 HNRNPCL1O60812 293 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 CDC25BP30305 580 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 MTERF2Q49AM1 385 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 TRIML1Q8N9V2 468 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 FBXO18Q8NFZ0 1043 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 PALMDQ9NP74 551 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 DCTN4Q9UJW0 460 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 PCDHA4Q9UN74 947 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 TCIRG1Q13488 830 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 ANKRD36BP1Q96IX9 119 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 ZCCHC17Q9NP64 241 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 BLVRAP53004 296 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 ZNF658Q5TYW1 1059 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 HACE1Q8IYU2 909 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 RPS6KC1Q96S38 1066 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 LZTS1Q9Y250 596 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 TRIM49BA6NDI0 452 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 KIF11P52732 1056 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 PACSIN2Q9UNF0 486 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 NCLNQ969V3 563 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 FMO2Q99518 471 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 SNX24Q9Y343 169 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 PHLPP2Q6ZVD8 1323 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 ESYT3A0FGR9 886 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 GGCXP38435 758 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 SLC39A14Q15043 492 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 DNAJC24Q6P3W2 148 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 FBXL13Q8NEE6 735 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 SAYSD1Q9NPB0 183 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 PPARGC1AQ9UBK2 798 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 ZNF711Q9Y462 761 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 CSADQ9Y600 493 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 NDUFA10O95299 355 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 FMNL1O95466 1100 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 XPAP23025 273 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 CCDC85BQ15834 202 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 A0A087WUV0 522 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 KCNA1Q09470 495 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 IQCDQ96DY2 449 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 HEXIM2Q96MH2 286 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 TRPV6Q9H1D0 765 aa18.12■□□□□ 0.49
TSPAN3-201ENST00000267970 FGGP02679 453 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 SRGAP2CP0DJJ0 459 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 PLCG1P19174 1290 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 ABCB5Q2M3G0 1257 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 MAP7D3Q8IWC1 876 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 CSRNP1Q96S65 589 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 PALMO75781 387 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 RWDD4Q6NW29 188 aaKnown RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 SPZ1Q9BXG8 430 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 SNX25Q9H3E2 840 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 TXLNGQ9NUQ3 528 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 MMEP08473 750 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 CCDC90BQ9GZT6 254 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 MIGA2Q7L4E1 593 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 PYROXD1Q8WU10 500 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 DBNLQ9UJU6 430 aaKnown RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 NOP14P78316 857 aaKnown RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 RNF207Q6ZRF8 634 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 IL17REQ8NFR9 667 aa18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 ZNF668Q96K58 619 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 POLR3CQ9BUI4 534 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-201ENST00000267970 USP17L3A6NCW0 530 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 USP17L4A6NCW7 530 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 SH3BGRP55822 239 aaPredicted RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 USP17L1Q7RTZ2 530 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 PUS7LQ9H0K6 701 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 WARS2Q9UGM6 360 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 ADAMTS1Q9UHI8 967 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 ZBTB22O15209 634 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 MAFGO15525 162 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 PAGE5Q96GU1 130 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 RUNDC3BQ96NL0 473 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 HDAC6Q9UBN7 1215 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 SPAG7O75391 227 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 FAM182BQ5T319 152 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 FAF2Q96CS3 445 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 CEP170P1Q96L14 293 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 UGGT2Q9NYU1 1516 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 SOX11P35716 441 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 GFPT1Q06210 699 aaPredicted RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 KRT31Q15323 416 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 ALG13Q9NP73 1137 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 USP27XA6NNY8 438 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 USP17L8P0C7I0 530 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 HADHAP40939 763 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 CYP4F11Q9HBI6 524 aa18.1■□□□□ 0.49
TSPAN3-201ENST00000267970 APBA3O96018 575 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms