RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 PRDM1O75626 825 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 LUC7L3O95232 432 aaKnown RBP14.38□□□□□ -0.11
NUP54-201ENST00000264883 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
NUP54-201ENST00000264883 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
NUP54-201ENST00000264883 PFKFB3Q16875 520 aaPredicted RBP14.38□□□□□ -0.11
NUP54-201ENST00000264883 CWF19L1Q69YN2 538 aaKnown RBP14.38□□□□□ -0.11
NUP54-201ENST00000264883 TYW1BQ6NUM6 668 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.38□□□□□ -0.11
NUP54-201ENST00000264883 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 RTN3O95197 1032 aaPredicted RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 ALADP13716 330 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 CCND1P24385 295 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 KIF5BP33176 963 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 IGHMBP2P38935 993 aaKnown RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 PAPOLAP51003 745 aaKnown RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 KIF11P52732 1056 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 PSMD2Q13200 908 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 KLHDC7AQ5VTJ3 777 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 MFN1Q8IWA4 741 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 MIGA1Q8NAN2 632 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 GIMAP8Q8ND71 665 aaPredicted RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 HELBQ8NG08 1087 aaPredicted RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 LRRC45Q96CN5 670 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 TRIM47Q96LD4 638 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 TUBGCP2Q9BSJ2 902 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 WNT7AO00755 349 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 PMS1P54277 932 aaKnown RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 UAP1Q16222 522 aaPredicted RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 DRAXINQ8NBI3 349 aaPredicted RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 ZFATQ9P243 1243 aa14.37□□□□□ -0.11
NUP54-201ENST00000264883 SRP68Q9UHB9 627 aaKnown RBP14.37□□□□□ -0.11
NUP54-201ENST00000264883 FERP16591 822 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 ATP4AP20648 1035 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 MCM7P33993 719 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 MAGOHP61326 146 aaKnown RBP14.36□□□□□ -0.11
NUP54-201ENST00000264883 ITIH4Q14624 930 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 CCDC152Q4G0S7 254 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 SLC27A3Q5K4L6 730 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 GALNT17Q6IS24 598 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
NUP54-201ENST00000264883 NOX5Q96PH1 765 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 TSC22D3Q99576 134 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 ISCUQ9H1K1 167 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 ARHGAP20Q9P2F6 1191 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 ZNF804BA4D1E1 1349 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 RAD51CO43502 376 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 AKR1B10O60218 316 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 MAGEA1P43355 309 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
NUP54-201ENST00000264883 COBLL1Q53SF7 1204 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 FAM133BQ5BKY9 247 aaKnown RBP14.36□□□□□ -0.11
NUP54-201ENST00000264883 TTI2Q6NXR4 508 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 C2CD5Q86YS7 1000 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 ANKRD13CQ8N6S4 541 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 C4orf32Q8N8J7 132 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 XPO6Q96QU8 1125 aaKnown RBP14.36□□□□□ -0.11
NUP54-201ENST00000264883 ERGIC2Q96RQ1 377 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 FAM167BQ9BTA0 163 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 KCNMB3Q9NPA1 279 aa14.36□□□□□ -0.11
NUP54-201ENST00000264883 PAPOLBQ9NRJ5 636 aaKnown RBP14.36□□□□□ -0.11
NUP54-201ENST00000264883 CASZ1Q86V15 1759 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 GRID2IPA4D2P6 1211 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 BUB1O43683 1085 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 KIF4AO95239 1232 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 LCA5LO95447 670 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 NQO1P15559 274 aaKnown RBP14.35□□□□□ -0.11
NUP54-201ENST00000264883 HNRNPH3P31942 346 aaKnown RBP14.35□□□□□ -0.11
NUP54-201ENST00000264883 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
NUP54-201ENST00000264883 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
NUP54-201ENST00000264883 IL17AQ16552 155 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 DTHD1Q6ZMT9 781 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 RIOK1Q9BRS2 568 aaKnown RBP14.35□□□□□ -0.11
NUP54-201ENST00000264883 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 FAM129AQ9BZQ8 928 aa14.35□□□□□ -0.11
NUP54-201ENST00000264883 CNOT10Q9H9A5 744 aaKnown RBP14.35□□□□□ -0.11
NUP54-201ENST00000264883 DCDC2CA8MYV0 355 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 PJA2O43164 708 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ZPR1O75312 459 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 CCNE1P24864 410 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ABL2P42684 1182 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 BCAMP50895 628 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 DNA2P51530 1060 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 TNNC1P63316 161 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 TBC1D25Q3MII6 688 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ERMARDQ5T6L9 678 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 RPUSD2Q8IZ73 545 aaKnown RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 BLIDQ8IZY5 108 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 SRBD1Q8N5C6 995 aaKnown RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 EIF1ADQ8N9N8 165 aaKnown RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 UBLCP1Q8WVY7 318 aaPredicted RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 MTMR8Q96EF0 704 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms