RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 BCL2L12Q9HB09 334 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 ZNF302Q9NR11 478 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
SHANK3-201ENST00000262795 POC1B-GALNT4F8VUJ3 575 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 PRPF4O43172 522 aaKnown RBP eCLIP17.15■□□□□ 0.341e-6■■■■□ 19.5
SHANK3-201ENST00000262795 HUS1O60921 280 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 PIN4Q9Y237 131 aaKnown RBP17.15■□□□□ 0.34
SHANK3-201ENST00000262795 NFE2L3Q9Y4A8 694 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
SHANK3-201ENST00000262795 MAP3K1Q13233 1512 aa17.14■□□□□ 0.34
SHANK3-201ENST00000262795 MED7O43513 233 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 RARBP10826 455 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 PDE1BQ01064 536 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 SEPT5Q99719 369 aaPredicted RBP17.14■□□□□ 0.33
SHANK3-201ENST00000262795 ZNF853P0CG23 659 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 PTH1RQ03431 593 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 FBXL21Q9UKT6 434 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 G3BP2Q9UN86 482 aaKnown RBP17.14■□□□□ 0.33
SHANK3-201ENST00000262795 ARHGAP42A6NI28 874 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 BTBD18B2RXH4 712 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 PPFIA4O75335 1185 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 ATP11AP98196 1134 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 ARL13BQ3SXY8 428 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 CFAP69A5D8W1 941 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 CHL1O00533 1208 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 OCM2P0CE71 109 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 OCMP0CE72 109 aaPredicted RBP17.14■□□□□ 0.33
SHANK3-201ENST00000262795 CDC25AP30304 524 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 GBP1P32455 592 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 PHBP35232 272 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 MAP7D3Q8IWC1 876 aa17.14■□□□□ 0.33
SHANK3-201ENST00000262795 RPN1P04843 607 aaKnown RBP17.13■□□□□ 0.33
SHANK3-201ENST00000262795 HADHAP40939 763 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 NLRP12P59046 1061 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
SHANK3-201ENST00000262795 THEMIS2Q5TEJ8 643 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 KRT1P04264 644 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 TRIM14Q14142 442 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SDE2Q6IQ49 451 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 PCDHA4Q9UN74 947 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 FAM95CA0A1B0GW59 222 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 HOXB7P09629 217 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
SHANK3-201ENST00000262795 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 PRPSAP2O60256 369 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 EXOC3L4Q17RC7 722 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
SHANK3-201ENST00000262795 MAPK4P31152 587 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SNX21Q969T3 373 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
SHANK3-201ENST00000262795 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 KRIT1O00522 736 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 NUP160Q12769 1436 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SIK2Q9H0K1 926 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
SHANK3-201ENST00000262795 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 MFSD4BQ5TF39 518 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 NR2F2P24468 414 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 PHKA2P46019 1235 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 FAM26FQ5R3K3 315 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
SHANK3-201ENST00000262795 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 SPTLC1O15269 473 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 PPP6R3Q5H9R7 873 aaPredicted RBP17.12■□□□□ 0.33
SHANK3-201ENST00000262795 SAMD7Q7Z3H4 446 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 EAF2Q96CJ1 260 aaPredicted RBP17.12■□□□□ 0.33
SHANK3-201ENST00000262795 DNAJC7Q99615 494 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 GSTA4O15217 222 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 ADRA2BP18089 450 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 TTC19Q6DKK2 380 aaPredicted RBP17.12■□□□□ 0.33
SHANK3-201ENST00000262795 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 DPEP1P16444 411 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 KCNA1Q09470 495 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 PTPN21Q16825 1174 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 PDZD8Q8NEN9 1154 aa17.12■□□□□ 0.33
SHANK3-201ENST00000262795 INPP5BP32019 993 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 PSMC2P35998 433 aaKnown RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 COL15A1P39059 1388 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 SRGAP2O75044 1071 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 ATF2P15336 505 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 BASP1P80723 227 aaKnown RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 TMEM179Q6ZVK1 233 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 SEPT8Q92599 483 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 PARK7Q99497 189 aaKnown RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 SYF2O95926 243 aaKnown RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 CPP00450 1065 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 OR1G1P47890 313 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms