RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CYP3A7P24462 503 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 SLC18A3Q16572 532 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 QRICH1Q2TAL8 776 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 GLE1Q53GS7 698 aaKnown RBP16.79■□□□□ 0.28
DDX56-201ENST00000258772 ARSHQ5FYA8 562 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 EMBQ6PCB8 327 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 MS4A14Q96JA4 679 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 AIPL1Q9NZN9 384 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 PCDHA1Q9Y5I3 950 aa16.79■□□□□ 0.28
DDX56-201ENST00000258772 FRMD3A2A2Y4 597 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 KLRG2A4D1S0 409 aaPredicted RBP16.78■□□□□ 0.28
DDX56-201ENST00000258772 MED24O75448 989 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 PALMO75781 387 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 BRD2P25440 801 aaKnown RBP16.78■□□□□ 0.28
DDX56-201ENST00000258772 KLRC1P26715 233 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 TNFRSF8P28908 595 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 SCNN1DP51172 638 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 CDC42EP5Q6NZY7 148 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 C8orf74Q6P047 294 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 FAM76AQ8TAV0 307 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 MXD3Q9BW11 206 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 DDR1Q08345 913 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 RAPGEF1Q13905 1077 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 EDRF1Q3B7T1 1238 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 MBOAT7Q96N66 472 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 ANO3Q9BYT9 981 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 GOLGA6AQ9NYA3 693 aa16.78■□□□□ 0.28
DDX56-201ENST00000258772 A0A087X0T9 212 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 PPEF1O14829 653 aaPredicted RBP16.77■□□□□ 0.28
DDX56-201ENST00000258772 KRT18P05783 430 aaKnown RBP16.77■□□□□ 0.28
DDX56-201ENST00000258772 FAM228BP0C875 321 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 STAT3P40763 770 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 ARID5AQ03989 594 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 KCNH2Q12809 1159 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 SLFN12Q8IYM2 578 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 CCDC17Q96LX7 622 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDX56-201ENST00000258772 ZC3H12CQ9C0D7 883 aaKnown RBP16.77■□□□□ 0.28
DDX56-201ENST00000258772 GANQ9H2C0 597 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
DDX56-201ENST00000258772 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.28
DDX56-201ENST00000258772 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.27
DDX56-201ENST00000258772 QSER1Q2KHR3 1735 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 CETN3O15182 167 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 SHOX2O60902 331 aaPredicted RBP16.76■□□□□ 0.27
DDX56-201ENST00000258772 KLHL30Q0D2K2 578 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
DDX56-201ENST00000258772 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 SH3GL2Q99962 352 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 ZHX3Q9H4I2 956 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 TMEM51Q9NW97 253 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 PCDHGC5Q9Y5F6 944 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 POTEFA5A3E0 1075 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 TRIM66O15016 1216 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 PPFIA4O75335 1185 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 FTCDO95954 541 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 EPS15P42566 896 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 NFIAQ12857 509 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 KIAA0753Q2KHM9 967 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 POTEGQ6S5H5 508 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 POTEEQ6S8J3 1075 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 CAVIN3Q969G5 261 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 TRIM34Q9BYJ4 488 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 RSPH14Q9UHP6 348 aa16.76■□□□□ 0.27
DDX56-201ENST00000258772 POLRMTO00411 1230 aaKnown RBP16.75■□□□□ 0.27
DDX56-201ENST00000258772 MEIS2O14770 477 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 RAD21O60216 631 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 NR2F2P24468 414 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 ASIC2Q16515 512 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 MEI1Q5TIA1 1274 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 ALS2CLQ60I27 953 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 MOXD1Q6UVY6 613 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 CATSPER3Q86XQ3 398 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 TSEN2Q8NCE0 465 aaKnown RBP16.75■□□□□ 0.27
DDX56-201ENST00000258772 MKL1Q969V6 931 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 EHD4Q9H223 541 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 OPA1O60313 960 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 CASP5P51878 434 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 PSMC6P62333 389 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 SPIRE1Q08AE8 756 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 GIT2Q14161 759 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
DDX56-201ENST00000258772 CDC37Q16543 378 aaPredicted RBP16.75■□□□□ 0.27
DDX56-201ENST00000258772 IFT20Q8IY31 132 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 C10orf67Q8IYJ2 551 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 CRYGNQ8WXF5 182 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 TEKT1Q969V4 418 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
DDX56-201ENST00000258772 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
DDX56-201ENST00000258772 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms