RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 SCN10AQ9Y5Y9 1956 aa19.39■□□□□ 0.69
LIN28B-202ENST00000635857 KIAA0355O15063 1070 aa19.38■□□□□ 0.69
LIN28B-202ENST00000635857 CEP290O15078 2479 aa19.38■□□□□ 0.69
LIN28B-202ENST00000635857 NIPA1Q7RTP0 329 aa19.38■□□□□ 0.69
LIN28B-202ENST00000635857 SH3RF1Q7Z6J0 888 aa19.38■□□□□ 0.69
LIN28B-202ENST00000635857 KCNH7Q9NS40 1196 aa19.38■□□□□ 0.69
LIN28B-202ENST00000635857 TRIM43BA6NCK2 446 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 F2P00734 622 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 CYP3A4P08684 503 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 PSEN2P49810 448 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 MFSD10Q14728 455 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 KRT25Q7Z3Z0 450 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 PLA2G4DQ86XP0 818 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 CCDC83Q8IWF9 413 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 DAGLBQ8NCG7 672 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 NSUN7Q8NE18 718 aaKnown RBP19.37■□□□□ 0.69
LIN28B-202ENST00000635857 TRIM43Q96BQ3 446 aaPredicted RBP19.37■□□□□ 0.69
LIN28B-202ENST00000635857 AIFM3Q96NN9 605 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 KIF2CQ99661 725 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 GDF15Q99988 308 aa19.37■□□□□ 0.69
LIN28B-202ENST00000635857 JPH1Q9HDC5 661 aaPredicted RBP19.37■□□□□ 0.69
LIN28B-202ENST00000635857 GRIN2DO15399 1336 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 CCDC194A0A1B0GVG4 234 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 A0A1W2PPC1 479 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 B4GALT4O60513 344 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 CTDNEP1O95476 244 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 CD4P01730 458 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 LGALS2P05162 132 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 HOXD8P13378 290 aaPredicted RBP19.36■□□□□ 0.69
LIN28B-202ENST00000635857 KCNA2P16389 499 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 BMP8BP34820 402 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 NONOQ15233 471 aaKnown RBP eCLIP19.36■□□□□ 0.69
LIN28B-202ENST00000635857 KIAA0753Q2KHM9 967 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 CCDC155Q8N6L0 562 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 BADQ92934 168 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 TBC1D32Q96NH3 1257 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 GPR20Q99678 358 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 PHF20Q9BVI0 1012 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 TRPV6Q9H1D0 765 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 SLC9A2Q9UBY0 812 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 TBX21Q9UL17 535 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
LIN28B-202ENST00000635857 NFASCO94856 1347 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 MEIS1O00470 390 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 ATP9AO75110 1047 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 TIMP1P01033 207 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 UTP14CQ5TAP6 766 aaKnown RBP19.35■□□□□ 0.69
LIN28B-202ENST00000635857 TMEM199Q8N511 208 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 TBCKQ8TEA7 893 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 SEPT1Q8WYJ6 367 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 LLPHQ9BRT6 129 aaKnown RBP19.35■□□□□ 0.69
LIN28B-202ENST00000635857 PPP1R12CQ9BZL4 782 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 HIPK3Q9H422 1215 aa19.35■□□□□ 0.69
LIN28B-202ENST00000635857 H3BRB1 525 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 ARP10275 920 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 TCF7P36402 384 aaPredicted RBP19.34■□□□□ 0.69
LIN28B-202ENST00000635857 MCM2P49736 904 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 USP11P51784 963 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 HMGN5P82970 282 aaKnown RBP19.34■□□□□ 0.69
LIN28B-202ENST00000635857 FPGSQ05932 587 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 PRR16Q569H4 304 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 FAM184AQ8NB25 1140 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 CYP2W1Q8TAV3 490 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 KAT2BQ92831 832 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 ZNF577Q9BSK1 485 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 TUT1Q9H6E5 874 aaKnown RBP19.34■□□□□ 0.69
LIN28B-202ENST00000635857 AZI2Q9H6S1 392 aa19.34■□□□□ 0.69
LIN28B-202ENST00000635857 AGO4Q9HCK5 861 aaKnown RBP19.34■□□□□ 0.69
LIN28B-202ENST00000635857 TRMT13Q9NUP7 481 aaKnown RBP19.34■□□□□ 0.69
LIN28B-202ENST00000635857 FAM86B1E9PN63 330 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 JAK2O60674 1132 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 FAM86B2P0C5J1 330 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 KRT2P35908 639 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 SAFBQ15424 915 aaKnown RBP eCLIP19.33■□□□□ 0.68
LIN28B-202ENST00000635857 PTGISQ16647 500 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 HABP4Q5JVS0 413 aaKnown RBP19.33■□□□□ 0.68
LIN28B-202ENST00000635857 SESTD1Q86VW0 696 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 TDHQ8IZJ6 230 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 GLG1Q92896 1179 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 NAP1L4Q99733 375 aaKnown RBP19.33■□□□□ 0.68
LIN28B-202ENST00000635857 BACH2Q9BYV9 841 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 BCAS3Q9H6U6 928 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 TBC1D22BQ9NU19 505 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 GTF2IRD1Q9UHL9 959 aa19.33■□□□□ 0.68
LIN28B-202ENST00000635857 IPO5O00410 1097 aaKnown RBP19.32■□□□□ 0.68
LIN28B-202ENST00000635857 ADAMTS3O15072 1205 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 CIITAP33076 1130 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 PPIGQ13427 754 aaKnown RBP eCLIP19.32■□□□□ 0.682e-12■■□□□ 11.6
LIN28B-202ENST00000635857 BFSP2Q13515 415 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 MFSD5Q6N075 450 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 RETREG2Q8NC44 543 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 PPP1R13LQ8WUF5 828 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 CRYGNQ8WXF5 182 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
LIN28B-202ENST00000635857 C16orf70Q9BSU1 422 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 HDAC6Q9UBN7 1215 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 KIF3AQ9Y496 699 aa19.32■□□□□ 0.68
LIN28B-202ENST00000635857 IGLV3-22A0A075B6J6 115 aa19.31■□□□□ 0.68
LIN28B-202ENST00000635857 DDX39AO00148 427 aaKnown RBP19.31■□□□□ 0.68
LIN28B-202ENST00000635857 HAS3O00219 553 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms