RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 KANSL1LA0AUZ9 987 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 GOLGA8TH3BQL2 631 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 SMIM24O75264 130 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 GOLGA8HP0CJ92 632 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 IDI1Q13907 227 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 KCNS3Q9BQ31 491 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DARSP14868 501 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 SCNN1DP51172 638 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 NR5A1Q13285 461 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 STXBP2Q15833 593 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 CAPSLQ8WWF8 208 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 WNK4Q96J92 1243 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DDX21Q9NR30 783 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 HELLSQ9NRZ9 838 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 STOML1Q9UBI4 398 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 TTC41PQ6P2S7 1318 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 NCAPD3P42695 1498 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 HSPA1AP0DMV8 641 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 HSPA1BP0DMV9 641 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ANKRD20A3Q5VUR7 823 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SLC26A7Q8TE54 656 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 TTC17Q96AE7 1141 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 RUNDC3BQ96NL0 473 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 DACT1Q9NYF0 836 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 HCLS1P14317 486 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SH3BGRP55822 239 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 TSKSQ9UJT2 592 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 TSPOAP1O95153 1857 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 CCDC78A2IDD5 438 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 GOLGA8IPA6NC78 632 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 CELF2O95319 508 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 NUP62P37198 522 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 RNF207Q6ZRF8 634 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PDCD6IPQ8WUM4 868 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SPACA7Q96KW9 195 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 COL4A3BPQ9Y5P4 624 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ZNF644Q9H582 1327 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 BMP10O95393 424 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 DLATP10515 647 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ARID5BQ14865 1188 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 CCDC121Q6ZUS5 278 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 KRT78Q8N1N4 520 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 FLT1P17948 1338 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PSMD12O00232 456 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGAP6O43182 974 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ALCAMQ13740 583 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 LAMB3Q13751 1172 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SCFD1Q8WVM8 642 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 VMP1Q96GC9 406 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SP110Q9HB58 689 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PAPOLBQ9NRJ5 636 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SCHIP1Q9P0W5 487 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 KDM5BQ9UGL1 1544 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SPTLC2O15270 562 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 RANBP1P43487 201 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 POLA2Q14181 598 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ULK4Q96C45 1275 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGAP26Q9UNA1 814 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 INPP4BO15327 924 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 BLVRAP53004 296 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 NCALDP61601 193 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 MRPS15P82914 257 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ASPRV1Q53RT3 343 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PDXDC2PQ6P474 469 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 IP6K1Q92551 441 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SYMPKQ92797 1274 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PI4KBQ9UBF8 816 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ITSN2Q9NZM3 1697 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 H7C4K7 107 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SAT1P21673 171 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SCNN1BP51168 640 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PTH1RQ03431 593 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 IMPG1Q17R60 797 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 CCNYQ8ND76 341 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 NFKBIZQ9BYH8 718 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 NHEJ1Q9H9Q4 299 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 CLRN2A0PK11 232 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 USP17L12C9JPN9 530 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 USP17L21D6R901 530 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 TAC1P20366 129 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PDX1P52945 283 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 NCAPHQ15003 741 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PDIA6Q15084 440 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 SLFN13Q68D06 897 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PCSK9Q8NBP7 692 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ZNF577Q9BSK1 485 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 EFHD1Q9BUP0 239 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 GTF2E2P29084 291 aaKnown RBP6.78□□□□□ -1.32
CDKL5-205ENST00000623535 FAM160A1Q05DH4 1040 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 ABCC5O15440 1437 aa6.78□□□□□ -1.32
CDKL5-205ENST00000623535 PDE1BQ01064 536 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 TGM3Q08188 693 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 SLC12A1Q13621 1099 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 TP53BP2Q13625 1128 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 LRCH2Q5VUJ6 765 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGEF18Q6ZSZ5 1173 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 SLC38A7Q9NVC3 462 aa6.77□□□□□ -1.32
CDKL5-205ENST00000623535 VWA3AA6NCI4 1184 aa6.77□□□□□ -1.33
CDKL5-205ENST00000623535 XYLBO75191 536 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms