RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SAMM50Q9Y512 469 aa11.06□□□□□ -0.64
VTA1-205ENST00000620996 PTPRAP18433 802 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 CCNE1P24864 410 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 COASYQ13057 564 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 PTPN14Q15678 1187 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 MOXD1Q6UVY6 613 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 CCDC65Q8IXS2 484 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 PIGOQ8TEQ8 1089 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 BAG1Q99933 345 aaPredicted RBP11.05□□□□□ -0.64
VTA1-205ENST00000620996 TMOD4Q9NZQ9 345 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 KCNG1Q9UIX4 513 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
VTA1-205ENST00000620996 ARP10275 920 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 BACE1P56817 501 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 RBL2Q08999 1139 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 CEP55Q53EZ4 464 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 WNK4Q96J92 1243 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 EIF2AK1Q9BQI3 630 aaKnown RBP11.05□□□□□ -0.64
VTA1-205ENST00000620996 PPP1R9AQ9ULJ8 1098 aa11.05□□□□□ -0.64
VTA1-205ENST00000620996 B4DLN1 442 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 EML1O00423 815 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 MCF2L2Q86YR7 1114 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 SULF1Q8IWU6 871 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 CCAR2Q8N163 923 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 DCPSQ96C86 337 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 CNOT6LQ96LI5 555 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 BHMT2Q9H2M3 363 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 BRCA1P38398 1863 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 TBX3O15119 743 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 CASP14P31944 242 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 SUPT20HL1Q3ZLR7 823 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 FAM26FQ5R3K3 315 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 CCDC112Q8NEF3 446 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 CRYGNQ8WXF5 182 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 MBOAT7Q96N66 472 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 TSG101Q99816 390 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 TMX1Q9H3N1 280 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 ZNF536O15090 1300 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 PLA2G6O60733 806 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 SNRNP48Q6IEG0 339 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 TTI2Q6NXR4 508 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 SLC38A10Q9HBR0 1119 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 COL20A1Q9P218 1284 aa11.04□□□□□ -0.64
VTA1-205ENST00000620996 LIMA1Q9UHB6 759 aaKnown RBP11.04□□□□□ -0.64
VTA1-205ENST00000620996 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 TBCAO75347 108 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 CIITAP33076 1130 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 APTXQ7Z2E3 356 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 FAM114A1Q8IWE2 563 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 TUBGCP2Q9BSJ2 902 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 NOC4LQ9BVI4 516 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 SEMA6BQ9H3T3 888 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 THAP9Q9H5L6 903 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 RNF146Q9NTX7 359 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 RABGAP1Q9Y3P9 1069 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 IGLV3-22A0A075B6J6 115 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 SORBS3O60504 671 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 CYP3A4P08684 503 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 CYP11B2P19099 503 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 RPS6P62753 249 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 ARHGEF16Q5VV41 709 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 RNF207Q6ZRF8 634 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 TAAR1Q96RJ0 339 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 TEKT3Q9BXF9 490 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 VAV3Q9UKW4 847 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 SFI1A8K8P3 1242 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 IPO5O00410 1097 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 TRAF5O00463 557 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 RPA1P27694 616 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 SPIRE1Q08AE8 756 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 E4F1Q66K89 784 aaPredicted RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 TC2NQ8N9U0 490 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
VTA1-205ENST00000620996 FGFBP2Q9BYJ0 223 aa11.03□□□□□ -0.64
VTA1-205ENST00000620996 VWA5AO00534 786 aa11.02□□□□□ -0.65
VTA1-205ENST00000620996 ZBTB39O15060 712 aa11.02□□□□□ -0.65
VTA1-205ENST00000620996 EEF1GP26641 437 aaKnown RBP11.02□□□□□ -0.65
VTA1-205ENST00000620996 PPP1R2P41236 205 aa11.02□□□□□ -0.65
VTA1-205ENST00000620996 SP4Q02446 784 aa11.02□□□□□ -0.65
VTA1-205ENST00000620996 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.65
VTA1-205ENST00000620996 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
VTA1-205ENST00000620996 IRF2BP1Q8IU81 584 aa11.02□□□□□ -0.65
VTA1-205ENST00000620996 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.65
VTA1-205ENST00000620996 CLEC4DQ8WXI8 215 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms