RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 DDX11Q96FC9 970 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 FGD4Q96M96 766 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 MAP3K14Q99558 947 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 LRRC2Q9BYS8 371 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 PPP1R12CQ9BZL4 782 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.59□□□□□ -1.19
BRCC3-209ENST00000620502 ACAD9Q9H845 621 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 VAT1LQ9HCJ6 419 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 A1CFQ9NQ94 594 aaKnown RBP7.59□□□□□ -1.19
BRCC3-209ENST00000620502 HOMER2Q9NSB8 354 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 RNF146Q9NTX7 359 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 SLC5A4Q9NY91 659 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 CCPG1Q9ULG6 757 aa7.59□□□□□ -1.19
BRCC3-209ENST00000620502 HTTP42858 3142 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 MYH6P13533 1939 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 FRMPD3Q5JV73 1810 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 SLC35F4A4IF30 521 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 H3BM21 787 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 NFIBO00712 420 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CYTH3O43739 400 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 PPP1R11O60927 126 aaPredicted RBP7.58□□□□□ -1.2
BRCC3-209ENST00000620502 DDAH1O94760 285 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 SNAI1O95863 264 aaPredicted RBP7.58□□□□□ -1.2
BRCC3-209ENST00000620502 HMGB1P09429 215 aaKnown RBP7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CYBAP13498 195 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CPA1P15085 419 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CNTN2Q02246 1040 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CDC37Q16543 378 aaPredicted RBP7.58□□□□□ -1.2
BRCC3-209ENST00000620502 QRICH1Q2TAL8 776 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 PRAMEF19Q5SWL8 479 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 MFSD14CQ5VZR4 134 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 MAMDC4Q6UXC1 1216 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 PRICKLE2Q7Z3G6 844 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CATIPQ7Z7H3 387 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 SGMS1Q86VZ5 419 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 FAM133AQ8N9E0 248 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 TCEANC2Q96MN5 208 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 DEFB118Q96PH6 123 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 TINF2Q9BSI4 451 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 MYL10Q9BUA6 226 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 RIOX1Q9H6W3 641 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 CYP39A1Q9NYL5 469 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 BRPF3Q9ULD4 1205 aa7.58□□□□□ -1.2
BRCC3-209ENST00000620502 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
BRCC3-209ENST00000620502 ASTN1O14525 1302 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 PFASO15067 1338 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 CCDC69A6NI79 296 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 TMEM229AB2RXF0 380 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 ZBTB5O15062 677 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 WFS1O76024 890 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 TFRCP02786 760 aaKnown RBP7.57□□□□□ -1.2
BRCC3-209ENST00000620502 SMARCA1P28370 1054 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 GDF10P55107 478 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 MLLT1Q03111 559 aaPredicted RBP7.57□□□□□ -1.2
BRCC3-209ENST00000620502 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 UBE2Q1Q7Z7E8 422 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 FBXL16Q8N461 479 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 MSL3Q8N5Y2 521 aaKnown RBP7.57□□□□□ -1.2
BRCC3-209ENST00000620502 RGS22Q8NE09 1264 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 TBC1D5Q92609 795 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 JAKMIP1Q96N16 626 aaKnown RBP7.57□□□□□ -1.2
BRCC3-209ENST00000620502 PIGSQ96S52 555 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 PNMA2Q9UL42 364 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 SLC12A7Q9Y666 1083 aa7.57□□□□□ -1.2
BRCC3-209ENST00000620502 ABCB11O95342 1321 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 SYNGAP1Q96PV0 1343 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 OPLAHO14841 1288 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 DHX16O60231 1041 aaKnown RBP7.56□□□□□ -1.2
BRCC3-209ENST00000620502 PLEKHA8P1O95397 391 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 ZNF865P0CJ78 1059 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CALM1P0DP23 149 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CALM2P0DP24 149 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CALM3P0DP25 149 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CAPN2P17655 700 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 RXRAP19793 462 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 RPS6KB1P23443 525 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 PSMA5P28066 241 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 BAATQ14032 418 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-209ENST00000620502 USH1GQ495M9 461 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 APOA5Q6Q788 366 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 BLOC1S2Q6QNY1 142 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 SLC30A10Q6XR72 485 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 RNF207Q6ZRF8 634 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 Q6ZUG5 572 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 TRIM50Q86XT4 487 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 RAB11FIP4Q86YS3 637 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CCDC144CPQ8IYA2 1237 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CMTR1Q8N1G2 835 aaKnown RBP7.56□□□□□ -1.2
BRCC3-209ENST00000620502 SRBD1Q8N5C6 995 aaKnown RBP7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CCDC155Q8N6L0 562 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 FANCBQ8NB91 859 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 CTCFLQ8NI51 663 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-209ENST00000620502 MORC4Q8TE76 937 aa7.56□□□□□ -1.2
BRCC3-209ENST00000620502 SPZ1Q9BXG8 430 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms