RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PPFIA4O75335 1185 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 CRKP46108 304 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 BPIFB4P59827 614 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 MTERF2Q49AM1 385 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 HOMER3Q9NSC5 361 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 PTPN22Q9Y2R2 807 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 THAP12O43422 761 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 NEDD9Q14511 834 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 SEPT2Q15019 361 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 SUPT20HL1Q3ZLR7 823 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 DPP9Q86TI2 863 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 TULP4Q9NRJ4 1543 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 STK36Q9NRP7 1315 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 MOCS3O95396 460 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 GCKP35557 465 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 MXI1P50539 228 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 BFSP1Q12934 665 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 ANKRD20A3Q5VUR7 823 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZNF341Q9BYN7 854 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 HEXIM1O94992 359 aaKnown RBP13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 DDIT3P35638 169 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 SATB1Q01826 763 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 PSMD2Q13200 908 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 CIAPIN1Q6FI81 312 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 MCUR1Q96AQ8 359 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 MED10Q9BTT4 135 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 CRB1P82279 1406 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 ARHGAP25P42331 645 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 IFRD2Q12894 506 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 ANAPC4Q9UJX5 808 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZBTB5O15062 677 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 ASNSP08243 561 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 LRRC63Q05C16 580 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 GKAP1Q5VSY0 366 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 TMEM206Q9H813 350 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 UBE2TQ9NPD8 197 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
TNFAIP3-206ENST00000612899 RNF40O75150 1001 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 CRCPO75575 148 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 KIF11P52732 1056 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 TFAMQ00059 246 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 CCDC170Q8IYT3 715 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 P3H4Q92791 437 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 SYNJ2BP-COX16A0A087WUM0 186 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 I3L4J1 428 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 ATP11AP98196 1134 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 FAM160B2Q86V87 743 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 TRIM50Q86XT4 487 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 NSMCE1Q8WV22 266 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 CCT6BQ92526 530 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 CDHR1Q96JP9 859 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 MED4Q9NPJ6 270 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 COX16Q9P0S2 106 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 UTYO14607 1347 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 MFAP3LO75121 409 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 CIB2O75838 187 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 GABPB2Q8TAK5 448 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 PANX2Q96RD6 677 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 RFX7Q2KHR2 1363 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 GOLGA8IPA6NC78 632 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 GOLGA8JA6NMD2 632 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L10C9JJH3 530 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 ATF2P15336 505 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 NT5C2P49902 561 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 TSGA10IPQ3SY00 556 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 SARM1Q6SZW1 724 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 PODNQ7Z5L7 613 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 SGMS1Q86VZ5 419 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 ABCA6Q8N139 1617 aa13.59□□□□□ -0.23
TNFAIP3-206ENST00000612899 LOC102724159A0A0B4J2E5 919 aa13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 PP2D1A8MPX8 630 aa13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 BUB1BO60566 1050 aaPredicted RBP13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 MAPK4P31152 587 aa13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 PWP2Q15269 919 aaKnown RBP13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 CCDC62Q6P9F0 684 aa13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 DAAM1Q9Y4D1 1078 aa13.58□□□□□ -0.23
TNFAIP3-206ENST00000612899 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
TNFAIP3-206ENST00000612899 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms