RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 POTEIP0CG38 1075 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 EEF2P13639 858 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 VPS41P49754 854 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 SF3B3Q15393 1217 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 POTEGQ6S5H5 508 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 POTEEQ6S8J3 1075 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC50Q8IVM0 306 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 CPXCR1Q8N123 301 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 RAD54LQ92698 747 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 MRRFQ96E11 262 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 NAP1L4Q99733 375 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 BHMT2Q9H2M3 363 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 MTRF1LQ9UGC7 380 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 FEZ2Q9UHY8 353 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 ATP8A1Q9Y2Q0 1164 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 ATP6V0A2Q9Y487 856 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 FMN2Q9NZ56 1722 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 PDS5AQ29RF7 1337 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 RASA1P20936 1047 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 ARHGAP25P42331 645 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 KCNH2Q12809 1159 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 GRAPQ13588 217 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 CERKLQ49MI3 558 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 EMBQ6PCB8 327 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 TRAPPC11Q7Z392 1133 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 SH3RF1Q7Z6J0 888 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 GUF1Q8N442 669 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 MSANTD4Q8NCY6 345 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 GRAPLQ8TC17 118 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 PIGOQ8TEQ8 1089 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 TEKT1Q969V4 418 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 EHMT1Q9H9B1 1298 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 RBM12Q9NTZ6 932 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 FAM169AQ9Y6X4 670 aa7.52□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC169A6NNP5 214 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 BACH1O14867 736 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 BUB1BO60566 1050 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 AKR1B1P15121 316 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 NR1D1P20393 614 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 ICA1Q05084 483 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 CALCOCO2Q13137 446 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PNMA8AQ86V59 439 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 DNAAF5Q86Y56 855 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 FAM178BQ8IXR5 827 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC105Q8IYK2 499 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 ARHGEF1Q92888 912 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 DDX47Q9H0S4 455 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 HOMER2Q9NSB8 354 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 GCNT4Q9P109 453 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 MAD2L2Q9UI95 211 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PVALEFA0A1B0GWK0 134 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 GAS7O60861 476 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 AFPP02771 609 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 ACTN1P12814 892 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 KRT5P13647 590 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PRPHP41219 470 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 IFNAR2P48551 515 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 MST1RQ04912 1400 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 IL17AQ16552 155 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 FBXO11Q86XK2 927 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 ANKS4BQ8N8V4 417 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 NEDD1Q8NHV4 660 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 HDAC7Q8WUI4 952 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 NARFQ9UHQ1 456 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 LCMT1Q9UIC8 334 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 BCS1LQ9Y276 419 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 RABGAP1Q9Y3P9 1069 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 A0A087WUV0 522 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PNMA6FA0A0J9YX94 578 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 A0A1W2PRG0 241 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 CETN2P41208 172 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 MAGEA9P43362 315 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 CARSP49589 748 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PLTPP55058 493 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 GUCY1A3Q02108 690 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 DHX9Q08211 1270 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 KCTD19Q17RG1 926 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 SBK1Q52WX2 424 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 SEL1L2Q5TEA6 688 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 SFR1Q86XK3 245 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 EFCAB13Q8IY85 973 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 CCDC127Q96BQ5 260 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 SH2D4AQ9H788 454 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 DBNDD1Q9H9R9 158 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 IL17RBQ9NRM6 502 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 SAMD15Q9P1V8 674 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 ASIC3Q9UHC3 531 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PLAAQ9Y263 795 aa7.51□□□□□ -1.21
SYNPO2-206ENST00000610556 PGRMC1O00264 195 aaKnown RBP7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 RPS6KA4O75676 772 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 SERPINB2P05120 415 aa7.5□□□□□ -1.21
SYNPO2-206ENST00000610556 POTEJP0CG39 1038 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms