RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 LZTS2Q9BRK4 669 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 SEC63Q9UGP8 760 aaKnown RBP17.47■□□□□ 0.39
TGFB1-202ENST00000597453 hCG_1642624A0A1W2PR95 340 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 PIK3CDO00329 1044 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 FIBPO43427 364 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 STAM2O75886 525 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 LIFRP42702 1097 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 KCNJ6P48051 423 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 TAP1Q03518 808 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 CYFIP1Q7L576 1253 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 TMTC2Q8N394 836 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 MICAL3Q7RTP6 2002 aa17.46■□□□□ 0.39
TGFB1-202ENST00000597453 NCOR1O75376 2440 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 C17orf102A2RUQ5 167 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 LCHNA4D1U4 455 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 H3BRB1 525 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 NOP56O00567 594 aaKnown RBP17.45■□□□□ 0.38
TGFB1-202ENST00000597453 PARNO95453 639 aaKnown RBP17.45■□□□□ 0.38
TGFB1-202ENST00000597453 HOXC8P31273 242 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 GNAQP50148 359 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 NEDD9Q14511 834 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 METTL7BQ6UX53 244 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 CUL5Q93034 780 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 GPR20Q99678 358 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 TUT1Q9H6E5 874 aaKnown RBP17.45■□□□□ 0.38
TGFB1-202ENST00000597453 THEGQ9P2T0 379 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 XIRP2A4UGR9 3374 aa17.45■□□□□ 0.38
TGFB1-202ENST00000597453 KAT6AQ92794 2004 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 KIF28PB7ZC32 967 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 TLL1O43897 1013 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 SMIM10L2AP0DMW4 78 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 SMIM10L2BP0DMW5 78 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 CALM1P0DP23 149 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 CALM2P0DP24 149 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 CALM3P0DP25 149 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 TMTC3Q6ZXV5 915 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 CCDC82Q8N4S0 544 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 ARNTL2Q8WYA1 636 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 SYMPKQ92797 1274 aaKnown RBP17.44■□□□□ 0.38
TGFB1-202ENST00000597453 RNPEPQ9H4A4 650 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 SLC12A7Q9Y666 1083 aa17.44■□□□□ 0.38
TGFB1-202ENST00000597453 TREHO43280 583 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 THPOP40225 353 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 SP4Q02446 784 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 UBE2SQ16763 222 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 KRT40Q6A162 431 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 XRRA1Q6P2D8 792 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 MICU3Q86XE3 530 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 ATXN2LQ8WWM7 1075 aaKnown RBP17.43■□□□□ 0.38
TGFB1-202ENST00000597453 ATP6V0A1Q93050 837 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 PSTPIP2Q9H939 334 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 MTCH2Q9Y6C9 303 aa17.43■□□□□ 0.38
TGFB1-202ENST00000597453 ABHD14A-ACY1A0A1B0GW23 586 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 LGR5O75473 907 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 UTP14CQ5TAP6 766 aaKnown RBP17.42■□□□□ 0.38
TGFB1-202ENST00000597453 NLRX1Q86UT6 975 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 FANCBQ8NB91 859 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 ASB2Q96Q27 587 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 SENP7Q9BQF6 1050 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 OSBPL7Q9BZF2 842 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 SETD4Q9NVD3 440 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 SIP14410 1827 aa17.42■□□□□ 0.38
TGFB1-202ENST00000597453 TCF20Q9UGU0 1960 aaKnown RBP17.41■□□□□ 0.38
TGFB1-202ENST00000597453 RSPH10B2B2RC85 870 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 ATP9AO75110 1047 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 GJB5O95377 273 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 RSPH10BP0C881 870 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 KCNA2P16389 499 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 ITGB5P18084 799 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 POU3F3P20264 500 aaPredicted RBP17.41■□□□□ 0.38
TGFB1-202ENST00000597453 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
TGFB1-202ENST00000597453 IKBKEQ14164 716 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 FAM117BQ6P1L5 589 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■□□□□ 10.5
TGFB1-202ENST00000597453 ZBED2Q9BTP6 218 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 EMSYQ7Z589 1322 aa17.41■□□□□ 0.38
TGFB1-202ENST00000597453 BDP1A6H8Y1 2624 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 CTSHP09668 335 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 MRPS5P82675 430 aaKnown RBP17.4■□□□□ 0.38
TGFB1-202ENST00000597453 GRB10Q13322 594 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 APOA5Q6Q788 366 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 DBF4BQ8NFT6 615 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 GPRASP2Q96D09 838 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 ZNF215Q9UL58 517 aaPredicted RBP17.4■□□□□ 0.38
TGFB1-202ENST00000597453 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
TGFB1-202ENST00000597453 CNTNAP5Q8WYK1 1306 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms