RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CRYGNQ8WXF5 182 aa19.67■□□□□ 0.74
SHKBP1-212ENST00000596163 PHF20Q9BVI0 1012 aa19.67■□□□□ 0.74
SHKBP1-212ENST00000596163 KCNJ14Q9UNX9 436 aa19.67■□□□□ 0.74
SHKBP1-212ENST00000596163 GRIN2DO15399 1336 aa19.67■□□□□ 0.74
SHKBP1-212ENST00000596163 KIAA1217Q5T5P2 1943 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 ATP9AO75110 1047 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 FDPSP14324 419 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 RAG1P15918 1043 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 CIITAP33076 1130 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 PSEN2P49810 448 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 CHMP4BP1P59074 171 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 HMGN5P82970 282 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 CHRDL2Q6WN34 429 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 GPR20Q99678 358 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 NFASCO94856 1347 aa19.66■□□□□ 0.74
SHKBP1-212ENST00000596163 CCDC194A0A1B0GVG4 234 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 ADAMTS3O15072 1205 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 F2P00734 622 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 CD4P01730 458 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 ARP10275 920 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 NONOQ15233 471 aaKnown RBP eCLIP19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 C7orf31Q8N865 590 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 CYP2W1Q8TAV3 490 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 SEPT1Q8WYJ6 367 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 KAT2BQ92831 832 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 GDF15Q99988 308 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 BCAS3Q9H6U6 928 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 AGO4Q9HCK5 861 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 JPH1Q9HDC5 661 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 PKD2L1Q9P0L9 805 aa19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 ZNF215Q9UL58 517 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-212ENST00000596163 TRIM43BA6NCK2 446 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 FAM86B1E9PN63 330 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 JAK2O60674 1132 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 FAM86B2P0C5J1 330 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 BMP8BP34820 402 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 MAGEA10P43363 369 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 SP4Q02446 784 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 MFSD10Q14728 455 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 KIAA0753Q2KHM9 967 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 SH3RF1Q7Z6J0 888 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 SESTD1Q86VW0 696 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 FAM184AQ8NB25 1140 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 TBCKQ8TEA7 893 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 TRIM43Q96BQ3 446 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 TBC1D22BQ9NU19 505 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 SLC9A2Q9UBY0 812 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 TCEAL9Q9UHQ7 104 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 NOD1Q9Y239 953 aa19.64■□□□□ 0.73
SHKBP1-212ENST00000596163 H3BRB1 525 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 M0R2N6 131 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 LGALS2P05162 132 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 ZNF286BP0CG31 522 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 KRT2P35908 639 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 MDM2Q00987 491 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 NPY5RQ15761 445 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 PRR16Q569H4 304 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 NAP1L4Q99733 375 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 ZNF577Q9BSK1 485 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 C16orf70Q9BSU1 422 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 TRPV6Q9H1D0 765 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 TUT1Q9H6E5 874 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 TBX21Q9UL17 535 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 COLQQ9Y215 455 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 KIF3AQ9Y496 699 aa19.63■□□□□ 0.73
SHKBP1-212ENST00000596163 IGLV3-22A0A075B6J6 115 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 A0A1W2PPC1 479 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 HAS3O00219 553 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 B4GALT4O60513 344 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 TIMP1P01033 207 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 TCF7P36402 384 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 ST3GAL1Q11201 340 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 SAFBQ15424 915 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 UTP14CQ5TAP6 766 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 MOXD1Q6UVY6 613 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 UBE2OQ9C0C9 1292 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 ALPK3Q96L96 1907 aa19.62■□□□□ 0.73
SHKBP1-212ENST00000596163 IPO5O00410 1097 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 DTNBO60941 627 aa19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 SLC34A2O95436 690 aa19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 BADQ92934 168 aa19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 TNPO1Q92973 898 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 SMARCAD1Q9H4L7 1026 aa19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 AZI2Q9H6S1 392 aa19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 GJB4Q9NTQ9 266 aa19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 TRMT13Q9NUP7 481 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-212ENST00000596163 CYP3A7-CYP3A51PA0A087WV96 503 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 GSTTP1A0A1W2PQM5 241 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 MMP1P03956 469 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 GNAT1P11488 350 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 CYP3A7P24462 503 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 PTGISQ16647 500 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 Q4G0T1 1027 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 KRT40Q6A162 431 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 MFSD5Q6N075 450 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 TMEM199Q8N511 208 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 GLG1Q92896 1179 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 TMX3Q96JJ7 454 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 C8orf76Q96K31 380 aa19.6■□□□□ 0.73
SHKBP1-212ENST00000596163 PRO3102Q9H379 93 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms