RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GTF2IRD1Q9UHL9 959 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 DOCK5Q9H7D0 1870 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 ACRP10323 421 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 SREBF1P36956 1147 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 AKAP17AQ02040 695 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 AP3B2Q13367 1082 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 PTGISQ16647 500 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 CDHR1Q96JP9 859 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
SHKBP1-202ENST00000593764 MAFGO15525 162 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 LGALS2P05162 132 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 STK3Q13188 491 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 MTMR1Q13613 665 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 HIC1Q14526 733 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 JAKMIP3Q5VZ66 844 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 ZNF365Q70YC5 407 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 C7orf31Q8N865 590 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 GIMAP8Q8ND71 665 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 CRYGNQ8WXF5 182 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 SCLYQ96I15 445 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 RNPC3Q96LT9 517 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 IL23AQ9NPF7 189 aa21.14■□□□□ 0.97
SHKBP1-202ENST00000593764 H3BRB1 525 aa21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 NOP56O00567 594 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 RASIP1Q5U651 963 aa21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 CCDC12Q8WUD4 166 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 TUT1Q9H6E5 874 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 C6orf50Q9HD87 102 aa21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 KCNH7Q9NS40 1196 aa21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 TPCN1Q9ULQ1 816 aa21.13■□□□□ 0.97
SHKBP1-202ENST00000593764 MEIS1O00470 390 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 PITPNM1O00562 1244 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 EIF5BO60841 1220 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 ARHGAP4P98171 946 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 ZNF200P98182 395 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 SSRP1Q08945 709 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 SCRN1Q12765 414 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 CEP55Q53EZ4 464 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 DHX38Q92620 1227 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 VPS54Q9P1Q0 977 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 NOD1Q9Y239 953 aa21.12■□□□□ 0.97
SHKBP1-202ENST00000593764 CPLX1O14810 134 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 ARP10275 920 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 GNA11P29992 359 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 AK2P54819 239 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 SP4Q02446 784 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 TRIM50Q86XT4 487 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 TRIM22Q8IYM9 498 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 SH3GLB2Q9NR46 395 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 PKD2L1Q9P0L9 805 aa21.11■□□□□ 0.97
SHKBP1-202ENST00000593764 TRIP12Q14669 1992 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 GSTTP1A0A1W2PQM5 241 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 PFKFB2O60825 505 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 CYP3A4P08684 503 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 IQCF3P0C7M6 154 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 HOXC8P31273 242 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 SMAD3P84022 425 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 C8orf34Q49A92 452 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 MCTP2Q6DN12 878 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 PSRC1Q6PGN9 363 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 Q7L0L9 218 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 REXO1Q8N1G1 1221 aaKnown RBP21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 CCDC148Q8NFR7 591 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 RASGRP4Q8TDF6 673 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 HERVK_113Q902F9 699 aa21.1■□□□□ 0.97
SHKBP1-202ENST00000593764 COL6A3P12111 3177 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 FAM86B1E9PN63 330 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 DEXIO95424 95 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 FGBP02675 491 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 FAM86B2P0C5J1 330 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 SMIM10L2AP0DMW4 78 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 SMIM10L2BP0DMW5 78 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 TCF7P36402 384 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 RBL2Q08999 1139 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 BFSP2Q13515 415 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 UTP14CQ5TAP6 766 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 RPUSD2Q8IZ73 545 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 DEFB123Q8N688 67 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 RETREG2Q8NC44 543 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 CAGE1Q8TC20 777 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 SEPT1Q8WYJ6 367 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 WNT8BQ93098 351 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 SLKQ9H2G2 1235 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 RNPEPQ9H4A4 650 aa21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 AGO4Q9HCK5 861 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-202ENST00000593764 IGLV3-22A0A075B6J6 115 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 EDIL3O43854 480 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 PTK7Q13308 1070 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 ITGB3BPQ13352 177 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 SCN5AQ14524 2016 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 GPNMBQ14956 572 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 ANKRD1Q15327 319 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 TRIM71Q2Q1W2 868 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 FAM109BQ6ICB4 259 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 CPLX2Q6PUV4 134 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 NIPA1Q7RTP0 329 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 BICD2Q8TD16 824 aa21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 CXXC1Q9P0U4 656 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-202ENST00000593764 NFASCO94856 1347 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 619.2 ms