RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 GHRHRQ02643 423 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 IKQ13123 557 aaPredicted RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 SEMA3FQ13275 785 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 TMEM119Q4V9L6 283 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 DPP9Q86TI2 863 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 USP6NLQ92738 828 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 HAS1Q92839 578 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 SPATC1LQ9H0A9 340 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 KBTBD4Q9NVX7 518 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 DDX25Q9UHL0 483 aaKnown RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 COL11A1P12107 1806 aaPredicted RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 ABCB11O95342 1321 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 HTTP42858 3142 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 CYP3A4P08684 503 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 PLCG1P19174 1290 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 ERCC5P28715 1186 aaPredicted RBP10.57□□□□□ -0.72
VPS25-205ENST00000590339 CASP1P29466 404 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 CNGA1P29973 690 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 CDC25AP30304 524 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 CIITAP33076 1130 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 AFMP43652 599 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 ARHGAP4P98171 946 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 CACNB2Q08289 660 aaPredicted RBP10.57□□□□□ -0.72
VPS25-205ENST00000590339 CUL4BQ13620 913 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 PDIA5Q14554 519 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 TMEM132BQ14DG7 1078 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 TMEM266Q2M3C6 531 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 USH1GQ495M9 461 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 HYIQ5T013 277 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 ISM2Q6H9L7 571 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 NPLOC4Q8TAT6 608 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 ENOX1Q8TC92 643 aaKnown RBP10.57□□□□□ -0.72
VPS25-205ENST00000590339 LENG9Q96B70 501 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 PAWRQ96IZ0 340 aaKnown RBP10.57□□□□□ -0.72
VPS25-205ENST00000590339 MED15Q96RN5 788 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
VPS25-205ENST00000590339 FLRT1Q9NZU1 646 aa10.57□□□□□ -0.72
VPS25-205ENST00000590339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS25-205ENST00000590339 KIAA0100Q14667 2235 aaKnown RBP10.56□□□□□ -0.72
VPS25-205ENST00000590339 TBX3O15119 743 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 KLRC4O43908 158 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 PTMAP06454 111 aaKnown RBP10.56□□□□□ -0.72
VPS25-205ENST00000590339 TPM3P06753 285 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 ZNF18P17022 549 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 ADORA2AP29274 412 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
VPS25-205ENST00000590339 CYP2C19P33261 490 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 CLCN1P35523 988 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 TPM4P67936 248 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 GRB10Q13322 594 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 KCNB1Q14721 858 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 Q4G0T1 1027 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 MFSD14CQ5VZR4 134 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
VPS25-205ENST00000590339 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 ETNPPLQ8TBG4 499 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 DIS3LQ8TF46 1054 aaKnown RBP10.56□□□□□ -0.72
VPS25-205ENST00000590339 KIFC2Q96AC6 838 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 PNMA5Q96PV4 448 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 APBA2Q99767 749 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 RAB34Q9BZG1 259 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 RMND1Q9NWS8 449 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 ZNF536O15090 1300 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
VPS25-205ENST00000590339 POTEMA6NI47 508 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 SPDYE3A6NKU9 549 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 GOLGA6L6A8MZA4 724 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 PPP1R3GB7ZBB8 358 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 H0YGN5 161 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 VWA5AO00534 786 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 ZNF500O60304 480 aaPredicted RBP10.55□□□□□ -0.72
VPS25-205ENST00000590339 COBLO75128 1261 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 RPN1P04843 607 aaKnown RBP10.55□□□□□ -0.72
VPS25-205ENST00000590339 ICAM1P05362 532 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
VPS25-205ENST00000590339 STAT3P40763 770 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 TECP42680 631 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 TXKP42681 527 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 GRB14Q14449 540 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 CNNM4Q6P4Q7 775 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 CPXCR1Q8N123 301 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 STAMQ92783 540 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 SLF1Q9BQI6 1058 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 HTATIP2Q9BUP3 242 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 BLZF1Q9H2G9 400 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 KCNF1Q9H3M0 494 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 MROH8Q9H579 483 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 BLOC1S4Q9NUP1 217 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 LRWD1Q9UFC0 647 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 PPP1R9AQ9ULJ8 1098 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
VPS25-205ENST00000590339 CTDP1Q9Y5B0 961 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms