RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 NCAPH2Q6IBW4 605 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 PARD6BQ9BYG5 372 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 PCDHA2Q9Y5H9 948 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 CTAGE15A4D2H0 777 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 TUBBP07437 444 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 CTAGE8P0CG41 777 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 STAT3P40763 770 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 JAG1P78504 1218 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 CTAGE6Q86UF2 777 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 CATSPER3Q86XQ3 398 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 CTAGE4Q8IX94 777 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 TXLNBQ8N3L3 684 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 OGFOD1Q8N543 542 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 CHURC1Q8WUH1 139 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 TANGO6Q9C0B7 1094 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 NUCKS1Q9H1E3 243 aaKnown RBP21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 EMILIN3Q9NT22 766 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 PUF60Q9UHX1 559 aaKnown RBP21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 TMX2Q9Y320 296 aa21.22■□□□□ 0.99
PRKCSH-209ENST00000589838 A0A1W2PRG0 241 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 TCP10L2B9ZVM9 353 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 USO1O60763 962 aaKnown RBP21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 VIL1P09327 827 aaKnown RBP21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 MARSP56192 900 aaKnown RBP21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 KIF5AQ12840 1032 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 TTLL6Q8N841 843 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 SYT2Q8N9I0 419 aaPredicted RBP21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 PSMD1Q99460 953 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 EHMT1Q9H9B1 1298 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 ARFGAP3Q9NP61 516 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 ZNF70Q9UC06 446 aaPredicted RBP21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 FAM184BQ9ULE4 1060 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 FHOD1Q9Y613 1164 aa21.21■□□□□ 0.99
PRKCSH-209ENST00000589838 PNMA6AP0CW24 399 aaPredicted RBP21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 VAV2P52735 878 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 AMPD2Q01433 879 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 RRP1BQ14684 758 aaKnown RBP21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 EDRF1Q3B7T1 1238 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 FKBP1CQ5VVH2 108 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 GLIS3Q8NEA6 775 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 LENG9Q96B70 501 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 P2RX7Q99572 595 aaKnown RBP21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 POLR3CQ9BUI4 534 aaPredicted RBP21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 VPS33BQ9H267 617 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 FAM207AQ9NSI2 230 aaPredicted RBP21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 POTEFA5A3E0 1075 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 CCDC151A5D8V7 595 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 POTEIP0CG38 1075 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 CC2D1AQ6P1N0 951 aaPredicted RBP21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 POTEGQ6S5H5 508 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 POTEEQ6S8J3 1075 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 CACNA2D4Q7Z3S7 1137 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 SH2D4AQ9H788 454 aa21.2■□□□□ 0.98
PRKCSH-209ENST00000589838 FAM86B1E9PN63 330 aa21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 FAM86B2P0C5J1 330 aa21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 ARSHQ5FYA8 562 aa21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 TRAPPC11Q7Z392 1133 aa21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 ZC3H3Q8IXZ2 948 aaKnown RBP21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 ZSWIM4Q9H7M6 989 aa21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 TBC1D7Q9P0N9 293 aa21.19■□□□□ 0.98
PRKCSH-209ENST00000589838 CETN3O15182 167 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 MSH4O15457 936 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 TBC1D12O60347 775 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 PLA2G6O60733 806 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 SPATA31C1P0DKV0 1188 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 ZSCAN20P17040 1043 aaPredicted RBP21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 SPICE1Q8N0Z3 855 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 LARGE2Q8N3Y3 721 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 MSANTD4Q8NCY6 345 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 SCFD1Q8WVM8 642 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 UIMC1Q96RL1 719 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 GMLQ99445 158 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 KCTD10Q9H3F6 313 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 DEF6Q9H4E7 631 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 TRIM10Q9UDY6 481 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 NPHP3-ACAD11A0A0J9YXS1 232 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 ANO9A1A5B4 782 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 OPLAHO14841 1288 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 NKRFO15226 690 aaKnown RBP eCLIP21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 LCA5LO95447 670 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 GIT2Q14161 759 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 SPDYE2Q495Y8 402 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 PAPD7Q5XG87 772 aaKnown RBP21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 RRAGAQ7L523 313 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 FAM160B2Q86V87 743 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 NELFCDQ8IXH7 590 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 SYN2Q92777 582 aaPredicted RBP21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 PURBQ96QR8 312 aaKnown RBP21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 ZHX3Q9H4I2 956 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 CEP72Q9P209 647 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 ZBTB21Q9ULJ3 1066 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 MRPL11Q9Y3B7 192 aaKnown RBP21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.18■□□□□ 0.981e-8■■□□□ 13
PRKCSH-209ENST00000589838 SAR1BQ9Y6B6 198 aa21.18■□□□□ 0.98
PRKCSH-209ENST00000589838 CLRN2A0PK11 232 aa21.17■□□□□ 0.98
PRKCSH-209ENST00000589838 GCOM1H8Y6P7 765 aaPredicted RBP21.17■□□□□ 0.98
PRKCSH-209ENST00000589838 ERLIN1O75477 346 aa21.17■□□□□ 0.98
PRKCSH-209ENST00000589838 POLR2MP0CAP2 368 aa21.17■□□□□ 0.98
PRKCSH-209ENST00000589838 HOXA13P31271 388 aaPredicted RBP21.17■□□□□ 0.98
PRKCSH-209ENST00000589838 PDXDC1Q6P996 788 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms