RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TRIM50Q86XT4 487 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 GJD3Q8N144 294 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 NEK9Q8TD19 979 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 MRPL38Q96DV4 380 aaKnown RBP13.81□□□□□ -0.2
BRCA1-225ENST00000586385 PIGSQ96S52 555 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 UBAC1Q9BSL1 405 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 KRT23Q9C075 422 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 TUT1Q9H6E5 874 aaKnown RBP13.81□□□□□ -0.2
BRCA1-225ENST00000586385 RIOX1Q9H6W3 641 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 DIAPH3Q9NSV4 1193 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
BRCA1-225ENST00000586385 FRMPD4Q14CM0 1322 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 EMSYQ7Z589 1322 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 C17orf102A2RUQ5 167 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 GRXCR2A6NFK2 248 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 H3BQ06 376 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-225ENST00000586385 CTSHP09668 335 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 GRM4Q14833 912 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 IMMTQ16891 758 aaKnown RBP13.8□□□□□ -0.2
BRCA1-225ENST00000586385 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 FCHSD1Q86WN1 690 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 TOP1MTQ969P6 601 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 INPP4AQ96PE3 977 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-225ENST00000586385 HCN4Q9Y3Q4 1203 aa13.8□□□□□ -0.2
BRCA1-225ENST00000586385 SUPT16HQ9Y5B9 1047 aaKnown RBP13.8□□□□□ -0.2
BRCA1-225ENST00000586385 COL4A6Q14031 1691 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 H3BNC9 293 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 GCOM1H8Y6P7 765 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-225ENST00000586385 POLR2MP0CAP2 368 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 CCND2P30279 289 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 ICAM3P32942 547 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 TCEAL5Q5H9L2 206 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 PTCRAQ6ISU1 281 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-225ENST00000586385 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 SAMD3Q8N6K7 520 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 GPR20Q99678 358 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 MLXIPQ9HAP2 919 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 SETD4Q9NVD3 440 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 CTNNA3Q9UI47 895 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 MICAL3Q7RTP6 2002 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 MUC6Q6W4X9 2439 aa13.79□□□□□ -0.2
BRCA1-225ENST00000586385 SPATA31C2B4DYI2 1134 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 TROAPQ12815 778 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 GPM6BQ13491 265 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 FAM26DQ5JW98 314 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 TMEM192Q8IY95 271 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 SEPT8Q92599 483 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 PIEZO1Q92508 2521 aa13.78□□□□□ -0.2
BRCA1-225ENST00000586385 MYH7BA7E2Y1 1941 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 CAND2O75155 1236 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 UPP2O95045 317 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 CHRNA1P02708 482 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 CYP21A2P08686 494 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 LTBRP36941 435 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 PTH1RQ03431 593 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 METTL7BQ6UX53 244 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 LMBR1Q8WVP7 490 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 PABPC5Q96DU9 382 aaKnown RBP13.77□□□□□ -0.21
BRCA1-225ENST00000586385 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 RC3H2Q9HBD1 1191 aaKnown RBP13.77□□□□□ -0.21
BRCA1-225ENST00000586385 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.21
BRCA1-225ENST00000586385 MYO7AQ13402 2215 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 PRR33A8MZF0 331 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 HIP1O00291 1037 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 GSPT1P15170 499 aaKnown RBP13.76□□□□□ -0.21
BRCA1-225ENST00000586385 ANTXR2P58335 489 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 ZP2Q05996 745 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 TIGD5Q53EQ6 642 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 RUFY4Q6ZNE9 571 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 SAMD11Q96NU1 681 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 USP26Q9BXU7 913 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 IFIH1Q9BYX4 1025 aaKnown RBP13.76□□□□□ -0.21
BRCA1-225ENST00000586385 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-225ENST00000586385 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 MYH6P13533 1939 aa13.76□□□□□ -0.21
BRCA1-225ENST00000586385 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
BRCA1-225ENST00000586385 PDE4AP27815 886 aa13.75□□□□□ -0.21
BRCA1-225ENST00000586385 SSTR3P32745 418 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-225ENST00000586385 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-225ENST00000586385 MGAT3Q09327 533 aa13.75□□□□□ -0.21
BRCA1-225ENST00000586385 PTPROQ16827 1216 aa13.75□□□□□ -0.21
BRCA1-225ENST00000586385 CTC1Q2NKJ3 1217 aa13.75□□□□□ -0.21
BRCA1-225ENST00000586385 NSUN3Q9H649 340 aaKnown RBP13.75□□□□□ -0.21
BRCA1-225ENST00000586385 BAZ2BQ9UIF8 2168 aaKnown RBP13.75□□□□□ -0.21
BRCA1-225ENST00000586385 C5orf67F2Z3F1 127 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 NOP56O00567 594 aaKnown RBP13.74□□□□□ -0.21
BRCA1-225ENST00000586385 MEIS2O14770 477 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
BRCA1-225ENST00000586385 GRM6O15303 877 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 FIBPO43427 364 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 ATP9AO75110 1047 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 ARHGAP4P98171 946 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 HYAL1Q12794 435 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms