RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	TMEM240	Q5SV17	173 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CCDC155	Q8N6L0	562 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CCDC148	Q8NFR7	591 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CAGE1	Q8TC20	777 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ZNF274	Q96GC6	653 aa	Predicted RBP	12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	GPR20	Q99678	358 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	C16orf70	Q9BSU1	422 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ALG1	Q9BT22	464 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SLC26A6	Q9BXS9	759 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ZMYND12	Q9H0C1	365 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	BCAS3	Q9H6U6	928 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	JADE2	Q9NQC1	790 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	HDAC6	Q9UBN7	1215 aa		12.5	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TRIP12	Q14669	1992 aa	Predicted RBP	12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CPLX1	O14810	134 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	MAFG	O15525	162 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	PPFIA3	O75145	1194 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	PFKM	P08237	780 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ACR	P10323	421 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	GNA11	P29992	359 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SP4	Q02446	784 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	BFSP2	Q13515	415 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	MCTP2	Q6DN12	878 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	C16orf59	Q7L2K0	433 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TRIM22	Q8IYM9	498 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	REXO1	Q8N1G1	1221 aa	Known RBP	12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SCLY	Q96I15	445 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CTAGE1	Q96RT6	745 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	MTIF3	Q9H2K0	278 aa	Known RBP	12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	C6orf50	Q9HD87	102 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TMEM260	Q9NX78	707 aa		12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ZNF215	Q9UL58	517 aa	Predicted RBP	12.49	□□□□□ -0.41
PPP4R1-208	ENST00000578178		H3BRB1	525 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ATP9A	O75110	1047 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	RFC2	P35250	354 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ARHGAP4	P98171	946 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	RBL2	Q08999	1139 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CEP55	Q53EZ4	464 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	RASIP1	Q5U651	963 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	JAKMIP3	Q5VZ66	844 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CPLX2	Q6PUV4	134 aa	Known RBP	12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	PPP4R3CP	Q6ZMV5	832 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ZNF365	Q70YC5	407 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TRIM50	Q86XT4	487 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	RPUSD2	Q8IZ73	545 aa	Known RBP	12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	DEFB123	Q8N688	67 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	RETREG2	Q8NC44	543 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	BICD2	Q8TD16	824 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	HERVK_113	Q902F9	699 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	IL17RA	Q96F46	866 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	MXRA8	Q9BRK3	442 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	LARP6	Q9BRS8	491 aa	Known RBP	12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TUT1	Q9H6E5	874 aa	Known RBP	12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	PKD2L1	Q9P0L9	805 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	VPS54	Q9P1Q0	977 aa		12.48	□□□□□ -0.41
PPP4R1-208	ENST00000578178	DEXI	O95424	95 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	IQCF3	P0C7M6	154 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	HOXC8	P31273	242 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TCF7	P36402	384 aa	Predicted RBP	12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SSRP1	Q08945	709 aa	Known RBP	12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	STK3	Q13188	491 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	PTK7	Q13308	1070 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ANKRD1	Q15327	319 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ZNF697	Q5TEC3	545 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178		Q7L0L9	218 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	AFAP1L1	Q8TED9	768 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CRYGN	Q8WXF5	182 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	DHX38	Q92620	1227 aa	Known RBP	12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	JPH1	Q9HDC5	661 aa	Predicted RBP	12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SH3GLB2	Q9NR46	395 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	KCNH7	Q9NS40	1196 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TELO2	Q9Y4R8	837 aa		12.47	□□□□□ -0.41
PPP4R1-208	ENST00000578178	LAMA2	P24043	3122 aa	Known RBP	12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	GBF1	Q92538	1859 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	TET1	Q8NFU7	2136 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	NFASC	O94856	1347 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	EMSY	Q7Z589	1322 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	KAT6A	Q92794	2004 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	C17orf102	A2RUQ5	167 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CDKL5	O76039	1030 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	FGB	P02675	491 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SMIM10L2A	P0DMW4	78 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SMIM10L2B	P0DMW5	78 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	ZNF76	P36508	570 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SET	Q01105	290 aa	Predicted RBP	12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SCRN1	Q12765	414 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	UTP14C	Q5TAP6	766 aa	Known RBP	12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	LRRC8D	Q7L1W4	858 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	NIPA1	Q7RTP0	329 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	OTOP2	Q7RTS6	562 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	DEFB128	Q7Z7B8	93 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	CYP2W1	Q8TAV3	490 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SEPT1	Q8WYJ6	367 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	VWCE	Q96DN2	955 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SDF4	Q9BRK5	362 aa		12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	SLK	Q9H2G2	1235 aa	Predicted RBP	12.46	□□□□□ -0.41
PPP4R1-208	ENST00000578178	STK36	Q9NRP7	1315 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms