RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRIM47Q96LD4 638 aa6□□□□□ -1.45
VAPA-203ENST00000577539 KCNQ5Q9NR82 932 aa6□□□□□ -1.45
VAPA-203ENST00000577539 MAGEC2Q9UBF1 373 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 FOXD3Q9UJU5 478 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 CCNL1Q9UK58 526 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 MORC2Q9Y6X9 1032 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 MYH7P12883 1935 aa6□□□□□ -1.45
VAPA-203ENST00000577539 XDHP47989 1333 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ORC4O43929 436 aa6□□□□□ -1.45
VAPA-203ENST00000577539 BAG3O95817 575 aa6□□□□□ -1.45
VAPA-203ENST00000577539 RPN1P04843 607 aaKnown RBP6□□□□□ -1.45
VAPA-203ENST00000577539 PCP11498 1178 aaKnown RBP6□□□□□ -1.45
VAPA-203ENST00000577539 RFC4P35249 363 aa6□□□□□ -1.45
VAPA-203ENST00000577539 KRT9P35527 623 aa6□□□□□ -1.45
VAPA-203ENST00000577539 NAPAP54920 295 aa6□□□□□ -1.45
VAPA-203ENST00000577539 CBLBQ13191 982 aa6□□□□□ -1.45
VAPA-203ENST00000577539 AGERQ15109 404 aa6□□□□□ -1.45
VAPA-203ENST00000577539 KRT31Q15323 416 aa6□□□□□ -1.45
VAPA-203ENST00000577539 LETM2Q2VYF4 491 aa6□□□□□ -1.45
VAPA-203ENST00000577539 CCDC93Q567U6 631 aa6□□□□□ -1.45
VAPA-203ENST00000577539 CCDC178Q5BJE1 867 aa6□□□□□ -1.45
VAPA-203ENST00000577539 CCDC181Q5TID7 509 aa6□□□□□ -1.45
VAPA-203ENST00000577539 RAD9BQ6WBX8 426 aa6□□□□□ -1.45
VAPA-203ENST00000577539 TMEM139Q8IV31 216 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ELOA2Q8IYF1 753 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 CCDC116Q8IYX3 515 aa6□□□□□ -1.45
VAPA-203ENST00000577539 ACRBPQ8NEB7 543 aa6□□□□□ -1.45
VAPA-203ENST00000577539 SH3RF3Q8TEJ3 882 aaPredicted RBP6□□□□□ -1.45
VAPA-203ENST00000577539 MRGPRX2Q96LB1 330 aa6□□□□□ -1.45
VAPA-203ENST00000577539 SLF1Q9BQI6 1058 aa6□□□□□ -1.45
VAPA-203ENST00000577539 GRIP2Q9C0E4 1043 aa6□□□□□ -1.45
VAPA-203ENST00000577539 THRAP3Q9Y2W1 955 aaKnown RBP6□□□□□ -1.45
VAPA-203ENST00000577539 A0A0U1RQJ8 604 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 TRIM49BA6NDI0 452 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 KCNJ18B7U540 433 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 TADA3O75528 432 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 ZNF76P36508 570 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 FXR1P51114 621 aaKnown RBP eCLIP5.99□□□□□ -1.45
VAPA-203ENST00000577539 COPB1P53618 953 aaKnown RBP5.99□□□□□ -1.45
VAPA-203ENST00000577539 CENPCQ03188 943 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 SPAG1Q07617 926 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 STIM1Q13586 685 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 KCNJ12Q14500 433 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 PTPROQ16827 1216 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 C11orf91Q3C1V1 193 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 SOGA3Q5TF21 947 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 CNGA4Q8IV77 575 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 ATRIPQ8WXE1 791 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 RMND1Q9NWS8 449 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 ADD3Q9UEY8 706 aaKnown RBP5.99□□□□□ -1.45
VAPA-203ENST00000577539 PRDM4Q9UKN5 801 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
VAPA-203ENST00000577539 NUP98P52948 1817 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 SLIT2O94813 1529 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 MYH15Q9Y2K3 1946 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 EFCAB8A8MWE9 144 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 FANCGO15287 622 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 MFAP3LO75121 409 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 GNAQP50148 359 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 ATP2B2Q01814 1243 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 WWC2Q6AWC2 1192 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 CCDC47Q96A33 483 aaKnown RBP5.99□□□□□ -1.45
VAPA-203ENST00000577539 FAM163AQ96GL9 167 aaPredicted RBP5.99□□□□□ -1.45
VAPA-203ENST00000577539 ZNF446Q9NWS9 450 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 COL1A1P02452 1464 aaPredicted RBP5.99□□□□□ -1.45
VAPA-203ENST00000577539 FAM205AQ6ZU69 1335 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 PAPPAQ13219 1627 aa5.99□□□□□ -1.45
VAPA-203ENST00000577539 PNMA6AP0CW24 399 aaPredicted RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 GABPB1Q06547 395 aaPredicted RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 NPY5RQ15761 445 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 RASGRP2Q7LDG7 609 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 CCDC148Q8NFR7 591 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 WDR66Q8TBY9 1149 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 GOLGA1Q92805 767 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 PYM1Q9BRP8 204 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 MAF1Q9H063 256 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 TCP11L1Q9NUJ3 509 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 NARFQ9UHQ1 456 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 GUCA1BQ9UMX6 200 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 PCDHA4Q9UN74 947 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 SPATA31A5Q5VU36 1347 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 SPATA31A7Q8IWB4 1347 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 NID2Q14112 1375 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 KLRF2D3W0D1 207 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 F8W031 263 aaPredicted RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 LDHCP07864 332 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 H2AFXP16104 143 aaPredicted RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 PRCPP42785 496 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 TRAPPC10P48553 1259 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 ASIC1P78348 528 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 IL17AQ16552 155 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 UTP14CQ5TAP6 766 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 JAKMIP3Q5VZ66 844 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 RCSD1Q6JBY9 416 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 TEX11Q8IYF3 940 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 SPATA20Q8TB22 786 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 RPGRQ92834 1020 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 PANX2Q96RD6 677 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 TMEM60Q9H2L4 133 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 ARFGAP3Q9NP61 516 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms