RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TRAF5O00463 557 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 SIGLEC6O43699 453 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 GDF11O95390 407 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 TM4SF1P30408 202 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 TNK2Q07912 1038 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 CPSF6Q16630 551 aaKnown RBP eCLIP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 DUSP27Q5VZP5 1158 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 TMC3Q7Z5M5 1100 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 LDHDQ86WU2 507 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 TRIM59Q8IWR1 403 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 CRACR2BQ8N4Y2 399 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 ADCY4Q8NFM4 1077 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 BRF1Q92994 677 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 PPP1R14AQ96A00 147 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 AARSD1Q9BTE6 412 aaKnown RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 METTL22Q9BUU2 404 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 LGR4Q9BXB1 951 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 CWC22Q9HCG8 908 aaKnown RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 AKT3Q9Y243 479 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 SLX4Q8IY92 1834 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 RAB3GAP2Q9H2M9 1393 aa7.21□□□□□ -1.25
SF3B3-214ENST00000572365 TRAV20A0A0B4J274 112 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 NOP56O00567 594 aaKnown RBP7.21□□□□□ -1.26
SF3B3-214ENST00000572365 GSC2O15499 205 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 TBX1O43435 398 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 FGFR1P11362 822 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 SRFP11831 508 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 CRKLP46109 303 aaKnown RBP7.21□□□□□ -1.26
SF3B3-214ENST00000572365 NMIQ13287 307 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-214ENST00000572365 GRB10Q13322 594 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 NFIXQ14938 502 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 FOXB2Q5VYV0 432 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 OLFM4Q6UX06 510 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 TMEM151AQ8N4L1 468 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 FIBCD1Q8N539 461 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 KISS1RQ969F8 398 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-214ENST00000572365 FEZ1Q99689 392 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 FER1L6Q2WGJ9 1857 aa7.21□□□□□ -1.26
SF3B3-214ENST00000572365 GNAT3A8MTJ3 354 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 H0YIN7 160 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 PRAMEF1O95521 474 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 IGLV1-40P01703 118 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 SERPINB2P05120 415 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
SF3B3-214ENST00000572365 OXCT1P55809 520 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 TCEA2Q15560 299 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 TKFCQ3LXA3 575 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 YOD1Q5VVQ6 348 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-214ENST00000572365 CST9Q5W186 159 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 EXOC2Q96KP1 924 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 PUS7Q96PZ0 661 aaKnown RBP7.2□□□□□ -1.26
SF3B3-214ENST00000572365 GPR62Q9BZJ7 368 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
SF3B3-214ENST00000572365 CHST7Q9NS84 486 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 CENPFP49454 3210 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 RNF123Q5XPI4 1314 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 ZNF541Q9H0D2 1346 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 CARMIL3Q8ND23 1372 aa7.2□□□□□ -1.26
SF3B3-214ENST00000572365 COL6A3P12111 3177 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 SHISA3A0PJX4 238 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 FSTP19883 344 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 HMGB2P26583 209 aaKnown RBP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 EPHX2P34913 555 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 GRIA2P42262 883 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 CIAPIN1Q6FI81 312 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 DLK2Q6UY11 383 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 SLC51AQ86UW1 340 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 DAGLBQ8NCG7 672 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 OSBP2Q969R2 916 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 CDC6Q99741 560 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 DHRS4Q9BTZ2 278 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 DSCC1Q9BVC3 393 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 HDAC8Q9BY41 377 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 ASCC2Q9H1I8 757 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 DUSP15Q9H1R2 295 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 DDX21Q9NR30 783 aaKnown RBP eCLIP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 SF3B6Q9Y3B4 125 aaKnown RBP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 ST14Q9Y5Y6 855 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 U3KQE9 123 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 CGNL1Q0VF96 1302 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 USP42Q9H9J4 1324 aaKnown RBP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 TRPM7Q96QT4 1865 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 A0A1W2PP64 1363 aa7.19□□□□□ -1.26
SF3B3-214ENST00000572365 POLR2AP24928 1970 aaKnown RBP7.19□□□□□ -1.26
SF3B3-214ENST00000572365 COL5A3P25940 1745 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 SCN4AP35499 1836 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 WDR64B1ANS9 1081 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 KCNH1O95259 989 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 ASMTLO95671 621 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 PABPC1P11940 636 aaKnown RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 PHKG2P15735 406 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 CTSKP43235 329 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 NKPD1Q17RQ9 610 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 FAM209AQ5JX71 171 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms