RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 FAM184AQ8NB25 1140 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 ESR2Q92731 530 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PMEPA1Q969W9 287 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 POP1Q99575 1024 aaKnown RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PBX4Q9BYU1 374 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 ZNF277Q9NRM2 450 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 IL17RBQ9NRM6 502 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 ORC3Q9UBD5 711 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 MKL2Q9ULH7 1088 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 DDX49Q9Y6V7 483 aaKnown RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PHIPQ8WWQ0 1821 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 UTRNP46939 3433 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 A0A1W2PP55 124 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 GOLGA6L22H0YM25 854 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 PCP11498 1178 aaKnown RBP6.65□□□□□ -1.34
SF3B3-210ENST00000567654 NCLP19338 710 aaKnown RBP6.65□□□□□ -1.34
SF3B3-210ENST00000567654 PDCP20941 246 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 PRELPP51888 382 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 TFAP4Q01664 338 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 TROAPQ12815 778 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 CCDC93Q567U6 631 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 STRIP1Q5VSL9 837 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 CAVIN1Q6NZI2 390 aaKnown RBP6.65□□□□□ -1.34
SF3B3-210ENST00000567654 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 C16orf86Q6ZW13 317 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 NPAS4Q8IUM7 802 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 CLEC10AQ8IUN9 316 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 GALNT12Q8IXK2 581 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 NUP133Q8WUM0 1156 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 NOL10Q9BSC4 688 aaKnown RBP6.65□□□□□ -1.34
SF3B3-210ENST00000567654 UBAC1Q9BSL1 405 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 PLVAPQ9BX97 442 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 SLC26A6Q9BXS9 759 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 MTFR1LQ9H019 292 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 USP40Q9NVE5 1235 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 FRRS1LQ9P0K9 344 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 SLC12A7Q9Y666 1083 aa6.65□□□□□ -1.34
SF3B3-210ENST00000567654 STK36Q9NRP7 1315 aa6.65□□□□□ -1.35
SF3B3-210ENST00000567654 WDR90Q96KV7 1748 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 COL11A1P12107 1806 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 DOCK1Q14185 1865 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 OTOFQ9HC10 1997 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 hCG_1642624A0A1W2PR95 340 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 SHTN1A0MZ66 631 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 FSD2A1L4K1 749 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 FAM181BA6NEQ2 426 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 H3BQV1 296 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 CPLX1O14810 134 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 ADAMTS3O15072 1205 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 EDN3P14138 238 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 IFNAR1P17181 557 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 PTMSP20962 102 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 COL8A1P27658 744 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 CDK8P49336 464 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 FKBP1AP62942 108 aaKnown RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 KIF23Q02241 960 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 GABPAQ06546 454 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 PDE4BQ07343 736 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 ENOX2Q16206 610 aaKnown RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 SHROOM1Q2M3G4 852 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 SLC35G1Q2M3R5 365 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 IFIT1BQ5T764 474 aaKnown RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 HHIPL2Q6UWX4 724 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 IL22RA1Q8N6P7 574 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 FANCBQ8NB91 859 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 TEKT1Q969V4 418 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 CHMP4CQ96CF2 233 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 PGBD1Q96JS3 809 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 C8orf76Q96K31 380 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 ZDHHC15Q96MV8 337 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 USP28Q96RU2 1077 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 PSMD1Q99460 953 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 ALG1Q9BT22 464 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 OSBPL5Q9H0X9 879 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 TMX4Q9H1E5 349 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-210ENST00000567654 DNAJC18Q9H819 358 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 PTPRFP10586 1907 aa6.64□□□□□ -1.35
SF3B3-210ENST00000567654 ERICH2A1L162 156 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 DDTLA6NHG4 134 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 TSPY2A6NKD2 308 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 PDE2AO00408 941 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 PSMD14O00487 310 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 GNB5O14775 395 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 SMNDC1O75940 238 aaKnown RBP eCLIP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 RAD17O75943 681 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 AKR1B1P15121 316 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 VEGFAP15692 232 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 SHMT1P34896 483 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 IARSP41252 1262 aaKnown RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 KRT85P78386 507 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 RASSF7Q02833 373 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 CEBPZQ03701 1054 aaKnown RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 SART3Q15020 963 aaKnown RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 PKN1Q16512 942 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 268.1 ms