RNA–Protein interactions for RNA: ENST00000565809.5

RPUSD1-207, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2 BASIC

Gene RPUSD1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-207ENST00000565809 NDUFB10O96000 172 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 SPA17Q15506 151 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 EPC1Q9H2F5 836 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 TAOK3Q9H2K8 898 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 COL4A3BPQ9Y5P4 624 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 SPDYE3A6NKU9 549 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 SSBP05455 408 aaKnown RBP eCLIP27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 BMP3P12645 472 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 TRAPPC11Q7Z392 1133 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 FAM20AQ96MK3 541 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 ZSWIM4Q9H7M6 989 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 RAB21Q9UL25 225 aa27.33■■□□□ 1.97
RPUSD1-207ENST00000565809 E9PMD0 336 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 VAV2P52735 878 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 IKQ13123 557 aaPredicted RBP27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 GPBP1Q86WP2 473 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 ETNPPLQ8TBG4 499 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 GJA10Q969M2 543 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 TRIM10Q9UDY6 481 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 FER1L6Q2WGJ9 1857 aa27.32■■□□□ 1.96
RPUSD1-207ENST00000565809 POTEB3A0JP26 581 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 ANO9A1A5B4 782 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 POTECB2RU33 542 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 GDF11O95390 407 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 SREBF1P36956 1147 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 KIF5AQ12840 1032 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 LRRC41Q15345 812 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 SHROOM1Q2M3G4 852 aaPredicted RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 PAPD7Q5XG87 772 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 POTEBQ6S5H4 581 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 PPP4R3CPQ6ZMV5 832 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 TDRD3Q9H7E2 651 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 MMRN2Q9H8L6 949 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 HERC5Q9UII4 1024 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 FRMD3A2A2Y4 597 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 YDJCA8MPS7 323 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 NFKBIEO00221 500 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 TRAF5O00463 557 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 USO1O60763 962 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 ERLIN1O75477 346 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 KCTD17Q8N5Z5 321 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 PURBQ96QR8 312 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 NUCKS1Q9H1E3 243 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 ANKZF1Q9H8Y5 726 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 PCDHA2Q9Y5H9 948 aa27.31■■□□□ 1.96
RPUSD1-207ENST00000565809 SEC31AO94979 1220 aaKnown RBP27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 TBC1D8O95759 1140 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 CYP11B2P19099 503 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 MARSP56192 900 aaKnown RBP27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 TXLNBQ8N3L3 684 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 NEK11Q8NG66 645 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 RPGRIP1Q96KN7 1286 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 FAM207AQ9NSI2 230 aaPredicted RBP27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 SAR1BQ9Y6B6 198 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 PSME4Q14997 1843 aa27.3■■□□□ 1.96
RPUSD1-207ENST00000565809 LCA5LO95447 670 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 CIITAP33076 1130 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 PLA2G4AP47712 749 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 CCDC40Q4G0X9 1142 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 HERC4Q5GLZ8 1057 aaPredicted RBP27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 COL4A5P29400 1685 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 NKRFO15226 690 aaKnown RBP eCLIP27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 GH2P01242 217 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 RPA1P27694 616 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 SLC12A3P55017 1021 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 SPIRE1Q08AE8 756 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 PRR16Q569H4 304 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 GLIS3Q8NEA6 775 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 GBP3Q9H0R5 595 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 TMOD2Q9NZR1 351 aa27.29■■□□□ 1.96
RPUSD1-207ENST00000565809 MED24O75448 989 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 KRT18P05783 430 aaKnown RBP27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 CSRNP1Q96S65 589 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 SYT17Q9BSW7 474 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 TANGO6Q9C0B7 1094 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 FAM184BQ9ULE4 1060 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 DNM3Q9UQ16 869 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 PIK3CDO00329 1044 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 CKAP4Q07065 602 aaKnown RBP27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 TERF2Q15554 542 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 EDRF1Q3B7T1 1238 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 EMILIN3Q9NT22 766 aa27.28■■□□□ 1.96
RPUSD1-207ENST00000565809 ATAD5Q96QE3 1844 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 CYP3A4P08684 503 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 LONRF2Q1L5Z9 754 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 USH1GQ495M9 461 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 ZC3H3Q8IXZ2 948 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 NIM1KQ8IY84 436 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 SECISBP2LQ93073 1101 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 LACRTQ9GZZ8 138 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 DEF6Q9H4E7 631 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 ARHGEF10LQ9HCE6 1279 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 ARHGAP20Q9P2F6 1191 aa27.27■■□□□ 1.96
RPUSD1-207ENST00000565809 CACNA2D4Q7Z3S7 1137 aa27.26■■□□□ 1.95
RPUSD1-207ENST00000565809 CATSPER3Q86XQ3 398 aa27.26■■□□□ 1.95
RPUSD1-207ENST00000565809 TRIM58Q8NG06 486 aa27.26■■□□□ 1.95
RPUSD1-207ENST00000565809 SYN2Q92777 582 aaPredicted RBP27.26■■□□□ 1.95
RPUSD1-207ENST00000565809 LENG9Q96B70 501 aa27.26■■□□□ 1.95
RPUSD1-207ENST00000565809 PRMT6Q96LA8 375 aaPredicted RBP27.26■■□□□ 1.95
RPUSD1-207ENST00000565809 STAT3P40763 770 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms