RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 USP17L1Q7RTZ2 530 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 CCDC63Q8NA47 563 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 WDR66Q8TBY9 1149 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 AGAP11Q8TF27 550 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 WASF1Q92558 559 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 OSBPL9Q96SU4 736 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 DNAJC7Q99615 494 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 KDM4CQ9H3R0 1056 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 EPB41L5Q9HCM4 733 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 RBM12Q9NTZ6 932 aaKnown RBP15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 NOP53Q9NZM5 478 aaKnown RBP15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 PCDHGC5Q9Y5F6 944 aa15.42■□□□□ 0.06
GTF3C1-203ENST00000562609 KCNJ18B7U540 433 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 F8W031 263 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 PYGLP06737 847 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 GHRP10912 638 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 ADRA2BP18089 450 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 KCNJ12Q14500 433 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 SPTY2D1Q68D10 685 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 CPLX4Q7Z7G2 160 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 P3H4Q92791 437 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 GGA1Q9UJY5 639 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 PLAAQ9Y263 795 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 MYH6P13533 1939 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 PHF20L1A8MW92 1017 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 UPP2O95045 317 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 GUCY2DQ02846 1103 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 FUT2Q10981 343 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 PAK2Q13177 524 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 SRBD1Q8N5C6 995 aaKnown RBP15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 SLC12A6Q9UHW9 1150 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 CAPN6Q9Y6Q1 641 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 CCDC88AQ3V6T2 1871 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 UBR3Q6ZT12 1888 aa15.41■□□□□ 0.06
GTF3C1-203ENST00000562609 EIF4E1BA6NMX2 242 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 POLRMTO00411 1230 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 WNT7AO00755 349 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 ADAMTS3O15072 1205 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 FGRP09769 529 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PAPOLAP51003 745 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 TBC1D1Q86TI0 1168 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 CCHCR1Q8TD31 782 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 FAM167BQ9BTA0 163 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 CSRNP2Q9H175 543 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 TMBIM4Q9HC24 238 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 ARPP21Q9UBL0 812 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 C5orf60A6NFR6 353 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PAFAH1B1P43034 410 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 SPAG1Q07617 926 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 BLMHQ13867 455 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 MFSD14BQ5SR56 506 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 CWF19L1Q69YN2 538 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 C1orf131Q8NDD1 294 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 RAPGEF5Q92565 580 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PAGE5Q96GU1 130 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PAIP2Q9BPZ3 127 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 MKNK2Q9HBH9 465 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PAPOLBQ9NRJ5 636 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 IL17RBQ9NRM6 502 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PANK4Q9NVE7 773 aa15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 PDS5AQ29RF7 1337 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-203ENST00000562609 HEXIM1O94992 359 aaKnown RBP15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 RIPK1Q13546 671 aa15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 ODF2Q5BJF6 829 aa15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 TBC1D16Q8TBP0 767 aa15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 RNF26Q9BY78 433 aaPredicted RBP15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 SLC5A4Q9NY91 659 aa15.39■□□□□ 0.06
GTF3C1-203ENST00000562609 A0A087X0B3 334 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 GCOM1H8Y6P7 765 aaPredicted RBP15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 MYZAPP0CAP1 466 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 BTDP43251 543 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 CCDC96Q2M329 555 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 C12orf60Q5U649 245 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 MREGQ8N565 214 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 STAMQ92783 540 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 MXD3Q9BW11 206 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 GDF3Q9NR23 364 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 LRWD1Q9UFC0 647 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 STX8Q9UNK0 236 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 BRWD3Q6RI45 1802 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 TACC1O75410 805 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 MYBL1P10243 752 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 LAMB3Q13751 1172 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 STAG2Q8N3U4 1231 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 KLHL23Q8NBE8 558 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 TSC22D3Q99576 134 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 MTA3Q9BTC8 594 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 MLXIPQ9HAP2 919 aa15.39■□□□□ 0.05
GTF3C1-203ENST00000562609 NID2Q14112 1375 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms