RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 EIF4BP23588 611 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 TEAD4Q15561 434 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 SDE2Q6IQ49 451 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 MFSD6Q6ZSS7 791 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 ALDH16A1Q8IZ83 802 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 IFT43Q96FT9 208 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 PRO3102Q9H379 93 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 RNF41Q9H4P4 317 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 RAVER2Q9HCJ3 691 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 DIAPH3Q9NSV4 1193 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 TACC3Q9Y6A5 838 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 PFASO15067 1338 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 A0A1W2PPC1 479 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 NMT2O60551 498 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 IL2RAP01589 272 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 NEFLP07196 543 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 FSHRP23945 695 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 NOS2P35228 1153 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 RTN1Q16799 776 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 RRP12Q5JTH9 1297 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 PRAMEF19Q5SWL8 479 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 EGFLAMQ63HQ2 1017 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 C7orf61Q8IZ16 206 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 DCAF4Q8WV16 495 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 SENP6Q9GZR1 1112 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 RAB6BQ9NRW1 208 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 HCN4Q9Y3Q4 1203 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 HRH3Q9Y5N1 445 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 FRMPD3Q5JV73 1810 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
HNRNPC-228ENST00000557033 BMP8BP34820 402 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 HAND2P61296 217 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 IKQ13123 557 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 MCF2L2Q86YR7 1114 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 ANKRD35Q8N283 1001 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 ESR2Q92731 530 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 TMEM47Q9BQJ4 181 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 DSCC1Q9BVC3 393 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 CTNNA3Q9UI47 895 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 ISY1Q9ULR0 285 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 SYNGAP1Q96PV0 1343 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 ALPK3Q96L96 1907 aa11.52□□□□□ -0.57
HNRNPC-228ENST00000557033 KBTBD13C9JR72 458 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 ZNF865P0CJ78 1059 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 RARBP10826 455 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 AKR1A1P14550 325 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 PCSK2P16519 638 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 LRRC26Q2I0M4 334 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 GJC2Q5T442 439 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 BTNL9Q6UXG8 535 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 KCTD1Q719H9 257 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 HS2ST1Q7LGA3 356 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 DGKHQ86XP1 1220 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 ZDHHC1Q8WTX9 485 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 GDF15Q99988 308 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 KLK14Q9P0G3 267 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 PNMA2Q9UL42 364 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 ZNF536O15090 1300 aa11.51□□□□□ -0.57
HNRNPC-228ENST00000557033 OPLAHO14841 1288 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 SNAI1O95863 264 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 TLR1Q15399 786 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 IMMTQ16891 758 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 ANO1Q5XXA6 986 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 SLC39A5Q6ZMH5 540 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 RNF180Q86T96 592 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 TRERF1Q96PN7 1200 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 ESYT1Q9BSJ8 1104 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 ABHD16BQ9H3Z7 469 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 GGT7Q9UJ14 662 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 FAM184BQ9ULE4 1060 aa11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
HNRNPC-228ENST00000557033 ICAM1P05362 532 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 TAL1P17542 331 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 ACVR2BQ13705 512 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 LRRC41Q15345 812 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 C1orf53Q5VUE5 145 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 TBC1D10CQ8IV04 446 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 CCDC116Q8IYX3 515 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 FAM133AQ8N9E0 248 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 GPR152Q8TDT2 470 aa11.49□□□□□ -0.57
HNRNPC-228ENST00000557033 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms