RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SLC5A4Q9NY91 659 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 SRPK3Q9UPE1 567 aa7.14□□□□□ -1.27
SYNE2-210ENST00000553455 SLC12A8A0AV02 714 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 WNT11O96014 354 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 SLC6A11P48066 632 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 CYP4F8P98187 520 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 MTMR1Q13613 665 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 SART3Q15020 963 aaKnown RBP7.13□□□□□ -1.27
SYNE2-210ENST00000553455 ZNF792Q3KQV3 632 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 LILRA2Q8N149 483 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 ASPSCR1Q9BZE9 553 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 TNFRSF12AQ9NP84 129 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 OXSMQ9NWU1 459 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 GPR160Q9UJ42 338 aa7.13□□□□□ -1.27
SYNE2-210ENST00000553455 THRAP3Q9Y2W1 955 aaKnown RBP7.13□□□□□ -1.27
SYNE2-210ENST00000553455 DVL2O14641 736 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 TADA3O75528 432 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 S100BP04271 92 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-210ENST00000553455 FIGNQ5HY92 759 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 BICRALQ6AI39 1079 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 NETO2Q8NC67 525 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 MYLIPQ8WY64 445 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 CD244Q9BZW8 370 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 DSEQ9UL01 958 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 SIT1Q9Y3P8 196 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 TELO2Q9Y4R8 837 aa7.12□□□□□ -1.27
SYNE2-210ENST00000553455 SRGAP3O43295 1099 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 TGM5O43548 720 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 KRT37O76014 449 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 DBHP09172 617 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 PNLIPP16233 465 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 KPNA1P52294 538 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-210ENST00000553455 IRF9Q00978 393 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 LRP8Q14114 963 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 SNX17Q15036 470 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 SEC23AQ15436 765 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 ATP13A4Q4VNC1 1196 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 ODR4Q5SWX8 454 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 STEAP3Q658P3 488 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 EFHBQ8N7U6 833 aa7.11□□□□□ -1.27
SYNE2-210ENST00000553455 RC3H2Q9HBD1 1191 aaKnown RBP7.11□□□□□ -1.27
SYNE2-210ENST00000553455 KRIT1O00522 736 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 SGSM2O43147 1006 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 PRKD3O94806 890 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 RAC2P15153 192 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 EPHA5P54756 1037 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 OCRLQ01968 901 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 CPZQ66K79 652 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
SYNE2-210ENST00000553455 SIRT2Q8IXJ6 389 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 RBM12BQ8IXT5 1001 aaKnown RBP7.1□□□□□ -1.27
SYNE2-210ENST00000553455 CNTD1Q8N815 330 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 CEP89Q96ST8 783 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 RNF32Q9H0A6 362 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 PUS7LQ9H0K6 701 aaKnown RBP7.1□□□□□ -1.27
SYNE2-210ENST00000553455 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-210ENST00000553455 RXFP1Q9HBX9 757 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 ZNF652Q9Y2D9 606 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 B3GALT1Q9Y5Z6 326 aa7.1□□□□□ -1.27
SYNE2-210ENST00000553455 A0A1W2PQJ5 194 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 H7C1D1 291 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 HGSO14964 777 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-210ENST00000553455 SLC27A2O14975 620 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 HYAL3O43820 417 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-210ENST00000553455 CLASP2O75122 1294 aaKnown RBP7.09□□□□□ -1.27
SYNE2-210ENST00000553455 LTFP02788 710 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 ERVFRD-1P60508 538 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 CHRNA2Q15822 529 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 ZMYM1Q5SVZ6 1142 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 CABP7Q86V35 215 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 ABI1Q8IZP0 508 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 KIAA1958Q8N8K9 716 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 SEC14L1Q92503 715 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 DLG3Q92796 817 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 MTMR8Q96EF0 704 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 SMOC1Q9H4F8 434 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 VTA1Q9NP79 307 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 MYOTQ9UBF9 498 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 ASH2LQ9UBL3 628 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 G3BP2Q9UN86 482 aaKnown RBP7.09□□□□□ -1.27
SYNE2-210ENST00000553455 SPO11Q9Y5K1 396 aa7.09□□□□□ -1.27
SYNE2-210ENST00000553455 K7ESF4 209 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 SCDO00767 359 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 PARNO95453 639 aaKnown RBP7.08□□□□□ -1.28
SYNE2-210ENST00000553455 SLC9A1P19634 815 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 C11orf74Q86VG3 221 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 RAVER1Q8IY67 606 aaKnown RBP7.08□□□□□ -1.28
SYNE2-210ENST00000553455 CLRN3Q8NCR9 226 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 ABHD4Q8TB40 342 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 JDP2Q8WYK2 163 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 SLC5A5Q92911 643 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 ELF4Q99607 663 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-210ENST00000553455 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-210ENST00000553455 TRHDEQ9UKU6 1024 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 PALD1Q9ULE6 856 aa7.08□□□□□ -1.28
SYNE2-210ENST00000553455 YBX2Q9Y2T7 364 aaKnown RBP7.08□□□□□ -1.28
SYNE2-210ENST00000553455 ATP23Q9Y6H3 246 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms