RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 NSUN6Q8TEA1 469 aaKnown RBP21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 DDX12PQ92771 950 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 MRFAP1L1Q96HT8 127 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 LRRC27Q9C0I9 530 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 UNC45AQ9H3U1 944 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 GBA2Q9HCG7 927 aaPredicted RBP21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 PVALEFA0A1B0GWK0 134 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 NR3C2P08235 984 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 PLA2G4BP0C869 781 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 MYCLP12524 364 aaPredicted RBP21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 PSMC6P62333 389 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 TEKT3Q9BXF9 490 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 RGL1Q9NZL6 768 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 CHMP2AO43633 222 aa21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 ZNF18P17022 549 aa21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 CYP4A11Q02928 519 aa21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 ITGB3BPQ13352 177 aaPredicted RBP21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 DYMQ7RTS9 669 aa21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 ADSSL1Q8N142 457 aa21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 TXNRD2Q9NNW7 524 aa21.86■■□□□ 1.09
RBFOX1-215ENST00000553186 SLITRK3O94933 977 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 SLC12A3P55017 1021 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 PDE4DQ08499 809 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 PABPC4Q13310 644 aaKnown RBP eCLIP21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 UNC13DQ70J99 1090 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 DNAJC19Q96DA6 116 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 MS4A4AQ96JQ5 239 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 EXOC1Q9NV70 894 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 RBPJLQ9UBG7 517 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 FBXO40Q9UH90 709 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 SOCS7O14512 581 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 CCND2P30279 289 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 CDC25BP30305 580 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 STX17P56962 302 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 STK4Q13043 487 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 SPATA1Q5VX52 437 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 KCTD17Q8N5Z5 321 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 PAGR1Q9BTK6 254 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 MOV10L1Q9BXT6 1211 aaKnown RBP21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 TUFT1Q9NNX1 390 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 MAPK8IP1Q9UQF2 711 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 SYNRGQ9UMZ2 1314 aa21.85■■□□□ 1.09
RBFOX1-215ENST00000553186 CELF2O95319 508 aaKnown RBP21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 OSBPP22059 807 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 EHHADHQ08426 723 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 CCDC47Q96A33 483 aaKnown RBP21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 INPP4AQ96PE3 977 aaPredicted RBP21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 RWDD2AQ9UIY3 292 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 DNM3Q9UQ16 869 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 CTNND2Q9UQB3 1225 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 CYP11B2P19099 503 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 FANCCQ00597 558 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 R3HDMLQ9H3Y0 253 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 PKD2L1Q9P0L9 805 aa21.84■■□□□ 1.09
RBFOX1-215ENST00000553186 FCER1AP12319 257 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 PAK1Q13153 545 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 CTTNQ14247 550 aaKnown RBP21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 EPHA7Q15375 998 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 ANKRD35Q8N283 1001 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 C2orf69Q8N8R5 385 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 SYT2Q8N9I0 419 aaPredicted RBP21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 SPC24Q8NBT2 197 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 DYDC2Q96IM9 177 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 SAMSN1Q9NSI8 373 aaKnown RBP21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 IFNKQ9P0W0 207 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 ASTN1O14525 1302 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 PFASO15067 1338 aa21.83■■□□□ 1.09
RBFOX1-215ENST00000553186 TESPA1A2RU30 521 aaPredicted RBP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 ATP9AO75110 1047 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 RGS20O76081 388 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 SSBP05455 408 aaKnown RBP eCLIP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 PTMAP06454 111 aaKnown RBP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 Q3C1V9 767 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 ARSHQ5FYA8 562 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 NCAPG2Q86XI2 1143 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 KIAA0895Q8NCT3 520 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 NELFBQ8WX92 580 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 HPS3Q969F9 1004 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 GTPBP4Q9BZE4 634 aaKnown RBP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 XPO4Q9C0E2 1151 aaKnown RBP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 TBC1D22BQ9NU19 505 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 DDX39AO00148 427 aaKnown RBP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 ERCC3P19447 782 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 MUTP22033 750 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 CNTN2Q02246 1040 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 COBLL1Q53SF7 1204 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 CST9Q5W186 159 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 GPBP1Q86WP2 473 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 DNERQ8NFT8 737 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 GPRASP2Q96D09 838 aa21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 WRAP73Q9P2S5 460 aaPredicted RBP21.82■■□□□ 1.08
RBFOX1-215ENST00000553186 ITGBL1O95965 494 aaPredicted RBP21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 HSP90AA4PQ58FG1 418 aa21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 TPH2Q8IWU9 490 aa21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 BMP2KQ9NSY1 1161 aaPredicted RBP21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 MAFGO15525 162 aa21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 COBLO75128 1261 aa21.81■■□□□ 1.08
RBFOX1-215ENST00000553186 SLC25A27O95847 323 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms