RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PLAGL2Q9UPG8 496 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 H0YIN7 160 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 AOC3Q16853 763 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 ODF2Q5BJF6 829 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 CEP85LQ5SZL2 805 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 KCNV1Q6PIU1 500 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 MKNK2Q9HBH9 465 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 CPP00450 1065 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 ALDH1B1P30837 517 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 USP8P40818 1118 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 VWA3BQ502W6 1294 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 ALS2CLQ60I27 953 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-230ENST00000552960 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 CDK5RAP3Q96JB5 506 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 PURBQ96QR8 312 aaKnown RBP13.62□□□□□ -0.23
HDAC7-230ENST00000552960 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 CXorf56Q9H5V9 222 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 ARPP21Q9UBL0 812 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-230ENST00000552960 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 FLT1P17948 1338 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 BAG3O95817 575 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 NR1D1P20393 614 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 LSP1P33241 339 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 TLR10Q9BXR5 811 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-230ENST00000552960 LTBP1Q14766 1721 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 NAPAP54920 295 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 NFIAQ12857 509 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 SHROOM1Q2M3G4 852 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-230ENST00000552960 TBC1D7Q9P0N9 293 aa13.62□□□□□ -0.23
HDAC7-230ENST00000552960 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 PALMO75781 387 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 DNAAF5Q86Y56 855 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 SUGP1Q8IWZ8 645 aaKnown RBP13.61□□□□□ -0.23
HDAC7-230ENST00000552960 KIAA0895Q8NCT3 520 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 OR2W6PQ8NHA6 318 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 ADAMTSL1Q8N6G6 1762 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 GOLGA6L10A6NI86 522 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
HDAC7-230ENST00000552960 PPP4CP60510 307 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 COA1Q9GZY4 146 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
HDAC7-230ENST00000552960 MEFVO15553 781 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-230ENST00000552960 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-230ENST00000552960 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
HDAC7-230ENST00000552960 AMPD3Q01432 767 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 PAK2Q13177 524 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 CD248Q9HCU0 757 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 ORC4O43929 436 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 ZBTB7AO95365 584 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 GSTO1P78417 241 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 KLHDC7AQ5VTJ3 777 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 NAA35Q5VZE5 725 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 CCSER1Q9C0I3 900 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-230ENST00000552960 RASA1P20936 1047 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 RDXP35241 583 aaKnown RBP13.6□□□□□ -0.23
HDAC7-230ENST00000552960 TCP10Q12799 353 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 RAPGEF1Q13905 1077 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 SLC35G1Q2M3R5 365 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 ZNF662Q6ZS27 426 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 SV2BQ7L1I2 683 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
HDAC7-230ENST00000552960 BIN2Q9UBW5 565 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-230ENST00000552960 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
HDAC7-230ENST00000552960 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
HDAC7-230ENST00000552960 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.23
HDAC7-230ENST00000552960 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
HDAC7-230ENST00000552960 TBC1D5Q92609 795 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 CCT8L2Q96SF2 557 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 PLAAQ9Y263 795 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 TRAF5O00463 557 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 TSPY3P0CV98 308 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 TSPY8P0CW00 308 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 CDK8P49336 464 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-230ENST00000552960 CEP57Q86XR8 500 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms