RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 RNF10Q8N5U6 811 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 ATP6V1G3Q96LB4 118 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 PLA2G12BQ9BX93 195 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 RAB21Q9UL25 225 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 PLA2G4BP0C869 781 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 ZNF131P52739 623 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 CUL1Q13616 776 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 EZH2Q15910 746 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 CAPN12Q6ZSI9 719 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 FAM178BQ8IXR5 827 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 SH2D4AQ9H788 454 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 CEP72Q9P209 647 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 KLHL14Q9P2G3 628 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 MEFVO15553 781 aaPredicted RBP11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 RHOBTB3O94955 611 aa11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 GAS8O95995 478 aa11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 GUCY2CP25092 1073 aa11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 KCTD1Q719H9 257 aa11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 ARHGEF2Q92974 986 aaKnown RBP11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 ZIM3Q96PE6 472 aa11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 ACTR5Q9H9F9 607 aaPredicted RBP11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.63
SMARCC2-209ENST00000550164 A0A087X0B3 334 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 LOC102724159A0A0B4J2E5 919 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 GMNCA6NCL1 334 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 PRPF6O94906 941 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 PSMD2Q13200 908 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 BIRC3Q13489 604 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 PWP2Q15269 919 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 TBC1D1Q86TI0 1168 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 DLG5Q8TDM6 1919 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 FERP16591 822 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 NEK9Q8TD19 979 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 KIFAP3Q92845 792 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 ELAC2Q9BQ52 826 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 SNX24Q9Y343 169 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 DIP2BQ9P265 1576 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 MAP2K7O14733 419 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 TROAPQ12815 778 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 SH3RF3Q8TEJ3 882 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 CCT8L2Q96SF2 557 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 TAF1DQ9H5J8 278 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 SYNCQ9H7C4 482 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 BARHL2Q9NY43 387 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 MINPP1Q9UNW1 487 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 CAPN6Q9Y6Q1 641 aa11.14□□□□□ -0.63
SMARCC2-209ENST00000550164 PVALEFA0A1B0GWK0 134 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 E9PMD0 336 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 THAP12O43422 761 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 ADCY8P40145 1251 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 HHATQ5VTY9 493 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 PDXDC1Q6P996 788 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 OTUD6AQ7L8S5 288 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 OR2W6PQ8NHA6 318 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 KLHL29Q96CT2 875 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 TCHPQ9BT92 498 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 PCDHA6Q9UN73 950 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 PCDHA8Q9Y5H6 950 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 PDS5AQ29RF7 1337 aaKnown RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 HIP1RO75146 1068 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 SUN1O94901 812 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 TDP2O95551 362 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 LMNB1P20700 586 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 LSP1P33241 339 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 CDK8P49336 464 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 HERVK_113P62684 666 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 DR1Q01658 176 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 CLUL1Q15846 466 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 PPP4R3AQ6IN85 833 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 RPAINQ86UA6 219 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 LMNTD2Q8IXW0 634 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 CELF1Q92879 486 aaKnown RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 ARL8AQ96BM9 186 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 ZNF512BQ96KM6 892 aaPredicted RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 AMACRQ9UHK6 382 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 GBP1P32455 592 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 SCNN1DP51172 638 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 COASYQ13057 564 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 SLFN12Q8IYM2 578 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms