RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 C7orf31Q8N865 590 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 BICD2Q8TD16 824 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 SLKQ9H2G2 1235 aaPredicted RBP19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 JADE2Q9NQC1 790 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 SH3GLB2Q9NR46 395 aa19.69■□□□□ 0.74
CHMP1A-208ENST00000550102 HAS3O00219 553 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 LGALS2P05162 132 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 CYP2C9P11712 490 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 CSF2RAP15509 400 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 KCNA2P16389 499 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 KIAA0753Q2KHM9 967 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 JAKMIP3Q5VZ66 844 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 GPR20Q99678 358 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 ALG1Q9BT22 464 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 BCAS3Q9H6U6 928 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 VPS54Q9P1Q0 977 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 UMODL1Q5DID0 1318 aa19.68■□□□□ 0.74
CHMP1A-208ENST00000550102 MAFGO15525 162 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 DEXIO95424 95 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 AK2P54819 239 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 ARHGAP4P98171 946 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 SP4Q02446 784 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 C8orf34Q49A92 452 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 CCDC155Q8N6L0 562 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 LRCH3Q96II8 777 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 RNPC3Q96LT9 517 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 MXRA8Q9BRK3 442 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 C16orf70Q9BSU1 422 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 WNT8AQ9H1J5 351 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 GTF2IRD1Q9UHL9 959 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 TPCN1Q9ULQ1 816 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 SZT2Q5T011 3432 aa19.67■□□□□ 0.74
CHMP1A-208ENST00000550102 PITPNM1O00562 1244 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 PFKFB2O60825 505 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 SCRN1Q12765 414 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 PTGISQ16647 500 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 CEP55Q53EZ4 464 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 GDF6Q6KF10 455 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 PSRC1Q6PGN9 363 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 FAM177A1Q8N128 213 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 KCNH7Q9NS40 1196 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 PKD2L1Q9P0L9 805 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 HDAC6Q9UBN7 1215 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 ZNF215Q9UL58 517 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 STK36Q9NRP7 1315 aa19.66■□□□□ 0.74
CHMP1A-208ENST00000550102 WDR81Q562E7 1941 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 H3BRB1 525 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 ATP9AO75110 1047 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 ZNF76P36508 570 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 NEK4P51957 841 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 CCL23P55773 120 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 BFSP2Q13515 415 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 NIPA1Q7RTP0 329 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 TRIM50Q86XT4 487 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 TUT1Q9H6E5 874 aaKnown RBP19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 JPH1Q9HDC5 661 aaPredicted RBP19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 IL23AQ9NPF7 189 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 GBF1Q92538 1859 aa19.65■□□□□ 0.74
CHMP1A-208ENST00000550102 NLRP5P59047 1200 aa19.64■□□□□ 0.73
CHMP1A-208ENST00000550102 GPR153Q6NV75 609 aa19.64■□□□□ 0.73
CHMP1A-208ENST00000550102 CYP2W1Q8TAV3 490 aa19.64■□□□□ 0.73
CHMP1A-208ENST00000550102 CAGE1Q8TC20 777 aa19.64■□□□□ 0.73
CHMP1A-208ENST00000550102 CRYGNQ8WXF5 182 aa19.64■□□□□ 0.73
CHMP1A-208ENST00000550102 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.64■□□□□ 0.731e-7■■□□□ 12.2
CHMP1A-208ENST00000550102 SDF4Q9BRK5 362 aa19.64■□□□□ 0.73
CHMP1A-208ENST00000550102 MYH9P35579 1960 aaKnown RBP19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 NFASCO94856 1347 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 MEIS1O00470 390 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 ADAMTS3O15072 1205 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 CYP3A4P08684 503 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 TCF7P36402 384 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 UTP14CQ5TAP6 766 aaKnown RBP19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 RETREG2Q8NC44 543 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 RASGRP4Q8TDF6 673 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 CTAGE1Q96RT6 745 aa19.63■□□□□ 0.73
CHMP1A-208ENST00000550102 PFKMP08237 780 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 SMIM10L2AP0DMW4 78 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 SMIM10L2BP0DMW5 78 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 ACRP10323 421 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 RFC2P35250 354 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 SETQ01105 290 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 TMEM240Q5SV17 173 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 SEPT1Q8WYJ6 367 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 GTF3C6Q969F1 213 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 SCLYQ96I15 445 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 MTIF3Q9H2K0 278 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 AGO4Q9HCK5 861 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 SLC9A2Q9UBY0 812 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 TELO2Q9Y4R8 837 aa19.62■□□□□ 0.73
CHMP1A-208ENST00000550102 TET1Q8NFU7 2136 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 EMSYQ7Z589 1322 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 FAM86B1E9PN63 330 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 FAM86B2P0C5J1 330 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 ARP10275 920 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 HOXC8P31273 242 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 RBL2Q08999 1139 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 PTK7Q13308 1070 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 GALNT17Q6IS24 598 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 ZNF365Q70YC5 407 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 C16orf59Q7L2K0 433 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms