RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 C17orf102A2RUQ5 167 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 LCHNA4D1U4 455 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 KIF28PB7ZC32 967 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 TLL1O43897 1013 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 STAM2O75886 525 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 SMIM10L2AP0DMW4 78 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 SMIM10L2BP0DMW5 78 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 THPOP40225 353 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 LIFRP42702 1097 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 NEDD9Q14511 834 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 UBE2SQ16763 222 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 TJAP1Q5JTD0 557 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
TROAP-203ENST00000546735 PCNX4Q63HM2 1172 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 KRT40Q6A162 431 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 METTL7BQ6UX53 244 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 MICU3Q86XE3 530 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 ATP6V0A1Q93050 837 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 TCEANC2Q96MN5 208 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 GPR20Q99678 358 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 RNPEPQ9H4A4 650 aa16.48■□□□□ 0.23
TROAP-203ENST00000546735 CHD9Q3L8U1 2897 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 TREHO43280 583 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 CALM1P0DP23 149 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 CALM2P0DP24 149 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 CALM3P0DP25 149 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 FAM117BQ6P1L5 589 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 SERINC5Q86VE9 423 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
TROAP-203ENST00000546735 ZBED2Q9BTP6 218 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 PSTPIP2Q9H939 334 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 SETD4Q9NVD3 440 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 THEGQ9P2T0 379 aa16.47■□□□□ 0.23
TROAP-203ENST00000546735 SPTBN5Q9NRC6 3674 aaKnown RBP16.47■□□□□ 0.23
TROAP-203ENST00000546735 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 ATP9AO75110 1047 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 PARNO95453 639 aaKnown RBP16.46■□□□□ 0.23
TROAP-203ENST00000546735 CTSHP09668 335 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
TROAP-203ENST00000546735 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 NLRX1Q86UT6 975 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 PKD2L1Q9P0L9 805 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
TROAP-203ENST00000546735 ABHD14A-ACY1A0A1B0GW23 586 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 LGR5O75473 907 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 HOXC8P31273 242 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 IKBKEQ14164 716 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
TROAP-203ENST00000546735 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 DBF4BQ8NFT6 615 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 ATXN2LQ8WWM7 1075 aaKnown RBP16.45■□□□□ 0.22
TROAP-203ENST00000546735 NEK1Q96PY6 1258 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 MYO9BQ13459 2157 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
TROAP-203ENST00000546735 ITGB5P18084 799 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 GRB10Q13322 594 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 SKIV2LQ15477 1246 aaKnown RBP16.44■□□□□ 0.22
TROAP-203ENST00000546735 ADCK5Q3MIX3 580 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 RNF20Q5VTR2 975 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 XRRA1Q6P2D8 792 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 ASB2Q96Q27 587 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 SENP7Q9BQF6 1050 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 PCDHA6Q9UN73 950 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 PCDHA8Q9Y5H6 950 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
TROAP-203ENST00000546735 SPDYE3A6NKU9 549 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
TROAP-203ENST00000546735 GJB5O95377 273 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 KCNA2P16389 499 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 TCF7P36402 384 aaPredicted RBP16.43■□□□□ 0.22
TROAP-203ENST00000546735 MRPS5P82675 430 aaKnown RBP16.43■□□□□ 0.22
TROAP-203ENST00000546735 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 EXOSC10Q01780 885 aaKnown RBP16.43■□□□□ 0.22
TROAP-203ENST00000546735 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 APOA5Q6Q788 366 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 GPRASP2Q96D09 838 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
TROAP-203ENST00000546735 MTUS1Q9ULD2 1270 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 DOCK5Q9H7D0 1870 aa16.43■□□□□ 0.22
TROAP-203ENST00000546735 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
TROAP-203ENST00000546735 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
TROAP-203ENST00000546735 TFF2Q03403 129 aa16.42■□□□□ 0.22
TROAP-203ENST00000546735 GDPD5Q8WTR4 605 aa16.42■□□□□ 0.22
TROAP-203ENST00000546735 LMBR1Q8WVP7 490 aa16.42■□□□□ 0.22
TROAP-203ENST00000546735 RAD9AQ99638 391 aa16.42■□□□□ 0.22
TROAP-203ENST00000546735 CHD7Q9P2D1 2997 aa16.42■□□□□ 0.22
TROAP-203ENST00000546735 EMSYQ7Z589 1322 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms