RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 PMFBP1Q8TBY8 1022 aa7.41□□□□□ -1.22
LINC02404-201ENST00000546710 DACT3Q96B18 629 aaPredicted RBP7.41□□□□□ -1.22
LINC02404-201ENST00000546710 NPHP3Q7Z494 1330 aa7.41□□□□□ -1.22
LINC02404-201ENST00000546710 A0A0C4DFX4 3053 aa7.41□□□□□ -1.22
LINC02404-201ENST00000546710 CUL9Q8IWT3 2517 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 SMAD7O15105 426 aaKnown RBP7.4□□□□□ -1.22
LINC02404-201ENST00000546710 BUB1BO60566 1050 aaPredicted RBP7.4□□□□□ -1.22
LINC02404-201ENST00000546710 KCNH1O95259 989 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 BMP7P18075 431 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 AFF3P51826 1226 aaKnown RBP7.4□□□□□ -1.22
LINC02404-201ENST00000546710 SLC15A2Q16348 729 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 TMEM151BQ8IW70 566 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 BVESQ8NE79 360 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 APBA2Q99767 749 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 FBLN5Q9UBX5 448 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 EMC9Q9Y3B6 208 aa7.4□□□□□ -1.22
LINC02404-201ENST00000546710 NUP188Q5SRE5 1749 aa7.4□□□□□ -1.23
LINC02404-201ENST00000546710 TNS1Q9HBL0 1735 aaKnown RBP7.39□□□□□ -1.23
LINC02404-201ENST00000546710 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
LINC02404-201ENST00000546710 F8W031 263 aaPredicted RBP7.39□□□□□ -1.23
LINC02404-201ENST00000546710 SSBP05455 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
LINC02404-201ENST00000546710 TCF3P15923 654 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 PRR5P85299 388 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 NCAPHQ15003 741 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 CNKSR3Q6P9H4 555 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 FAM129CQ86XR2 697 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 VPS37DQ86XT2 251 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 LGR4Q9BXB1 951 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 RWDD3Q9Y3V2 267 aa7.39□□□□□ -1.23
LINC02404-201ENST00000546710 RREB1Q92766 1687 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 ERVK-7P63135 1459 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 PIK3R4Q99570 1358 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 NCANO14594 1321 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 IRS2Q9Y4H2 1338 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 PRRG2O14669 202 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 TRIM13O60858 407 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 GLI4P10075 376 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 PAMP19021 973 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 ZNF143P52747 638 aaPredicted RBP7.38□□□□□ -1.23
LINC02404-201ENST00000546710 VMACQ2NL98 169 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 C6orf15Q6UXA7 325 aaPredicted RBP7.38□□□□□ -1.23
LINC02404-201ENST00000546710 PPP1R14AQ96A00 147 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 RXFP1Q9HBX9 757 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 GPRC5CQ9NQ84 441 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 ACTR10Q9NZ32 417 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 GULP1Q9UBP9 304 aa7.38□□□□□ -1.23
LINC02404-201ENST00000546710 DBR1Q9UK59 544 aaKnown RBP7.38□□□□□ -1.23
LINC02404-201ENST00000546710 SYCP2Q9BX26 1530 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 LRPPRCP42704 1394 aaKnown RBP7.37□□□□□ -1.23
LINC02404-201ENST00000546710 NPHP3-ACAD11A0A0J9YXS1 232 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 NOP56O00567 594 aaKnown RBP7.37□□□□□ -1.23
LINC02404-201ENST00000546710 PPP1R11O60927 126 aaPredicted RBP7.37□□□□□ -1.23
LINC02404-201ENST00000546710 NAT2P11245 290 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 FBLN1P23142 703 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 SCRN1Q12765 414 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
LINC02404-201ENST00000546710 POMZP3Q6PJE2 187 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 CRACR2BQ8N4Y2 399 aaPredicted RBP7.37□□□□□ -1.23
LINC02404-201ENST00000546710 LZTR1Q8N653 840 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 COPS5Q92905 334 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 PWWP2AQ96N64 755 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 ZCCHC4Q9H5U6 513 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 PARD6AQ9NPB6 346 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 CLEC1BQ9P126 229 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 TMEM131LA2VDJ0 1609 aa7.37□□□□□ -1.23
LINC02404-201ENST00000546710 COL22A1Q8NFW1 1626 aaPredicted RBP7.37□□□□□ -1.23
LINC02404-201ENST00000546710 CHD2O14647 1828 aaKnown RBP7.36□□□□□ -1.23
LINC02404-201ENST00000546710 B2RBV5 119 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 B8ZZF3 427 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 PLS3P13797 630 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 PFKLP17858 780 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 HOXA5P20719 270 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 IGFBP6P24592 240 aaPredicted RBP7.36□□□□□ -1.23
LINC02404-201ENST00000546710 ETFBP38117 255 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 LIMS1P48059 325 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 GNL2Q13823 731 aaKnown RBP7.36□□□□□ -1.23
LINC02404-201ENST00000546710 TNNI3KQ59H18 835 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 FAM178BQ8IXR5 827 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 MARCH10Q8NA82 808 aaPredicted RBP7.36□□□□□ -1.23
LINC02404-201ENST00000546710 MRGPRX3Q96LB0 322 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 KCNC2Q96PR1 638 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 MTA3Q9BTC8 594 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 RAPGEFL1Q9UHV5 662 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 NEXMIFQ5QGS0 1516 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 CASZ1Q86V15 1759 aa7.36□□□□□ -1.23
LINC02404-201ENST00000546710 MARF1Q9Y4F3 1742 aaKnown RBP7.35□□□□□ -1.23
LINC02404-201ENST00000546710 KDM2BQ8NHM5 1336 aa7.35□□□□□ -1.23
LINC02404-201ENST00000546710 TRBV23OR9-2A0A075B6M9 112 aa7.35□□□□□ -1.23
LINC02404-201ENST00000546710 C7orf72A4D263 438 aa7.35□□□□□ -1.23
LINC02404-201ENST00000546710 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
LINC02404-201ENST00000546710 MBLAC2Q68D91 279 aa7.35□□□□□ -1.23
LINC02404-201ENST00000546710 CABP7Q86V35 215 aa7.35□□□□□ -1.23
LINC02404-201ENST00000546710 TRIM59Q8IWR1 403 aa7.35□□□□□ -1.23
LINC02404-201ENST00000546710 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC02404-201ENST00000546710 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC02404-201ENST00000546710 BCAS3Q9H6U6 928 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms