RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 NT5C2P49902 561 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 AMPD3Q01432 767 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 PPFIA1Q13136 1202 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 CNNM4Q6P4Q7 775 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 PACS2Q86VP3 889 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 TEX11Q8IYF3 940 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 SPATA4Q8NEY3 305 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 LRRC1Q9BTT6 524 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 IL17RBQ9NRM6 502 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 MCM9Q9NXL9 1143 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 BARHL2Q9NY43 387 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 ARHGAP20Q9P2F6 1191 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 MAD2L2Q9UI95 211 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 GOLGA8KD6RF30 607 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 MOCS3O95396 460 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 FCER1AP12319 257 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 IRAK1P51617 712 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 KIF11P52732 1056 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 EAPPQ56P03 285 aaPredicted RBP12.7□□□□□ -0.38
DDB1-224ENST00000545894 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 TGFBRAP1Q8WUH2 860 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 OSBPL9Q96SU4 736 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 MLXIPQ9HAP2 919 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
DDB1-224ENST00000545894 HYOU1Q9Y4L1 999 aa12.7□□□□□ -0.38
DDB1-224ENST00000545894 ANKRD65E5RJM6 399 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 OPA1O60313 960 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 LCA5LO95447 670 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 PLCG2P16885 1265 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 YY1P25490 414 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 NFIAQ12857 509 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 VWA3BQ502W6 1294 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 HDAC7Q8WUI4 952 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 DEF6Q9H4E7 631 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 DMGDHQ9UI17 866 aaKnown RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 CYTH3O43739 400 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 EIF4A3P38919 411 aaKnown RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 EPHB4P54760 987 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 EMBQ6PCB8 327 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 KIAA0895Q8NCT3 520 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 RRP36Q96EU6 259 aaKnown RBP12.69□□□□□ -0.38
DDB1-224ENST00000545894 SH3GL2Q99962 352 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 HINFPQ9BQA5 517 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 CAPS2Q9BXY5 557 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
DDB1-224ENST00000545894 A0A087WUV0 522 aaPredicted RBP12.68□□□□□ -0.38
DDB1-224ENST00000545894 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDB1-224ENST00000545894 AKR1B10O60218 316 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 CPP00450 1065 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 PICALMQ13492 652 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 CCDC181Q5TID7 509 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 CENPPQ6IPU0 288 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 CCDC84Q86UT8 332 aaPredicted RBP12.68□□□□□ -0.38
DDB1-224ENST00000545894 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
DDB1-224ENST00000545894 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 NDST4Q9H3R1 872 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 FAM207AQ9NSI2 230 aaPredicted RBP12.68□□□□□ -0.38
DDB1-224ENST00000545894 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 SCN4AP35499 1836 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 EPHB6O15197 1021 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 CCNT1O60563 726 aaKnown RBP12.68□□□□□ -0.38
DDB1-224ENST00000545894 PAFAH1B1P43034 410 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 MATR3P43243 847 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDB1-224ENST00000545894 NONOQ15233 471 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDB1-224ENST00000545894 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 LETM2Q2VYF4 491 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 ALS2CLQ60I27 953 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 STIM2Q9P246 746 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 PGAP2Q9UHJ9 254 aa12.68□□□□□ -0.38
DDB1-224ENST00000545894 ABCB11O95342 1321 aa12.67□□□□□ -0.38
DDB1-224ENST00000545894 EBAG9O00559 213 aa12.67□□□□□ -0.38
DDB1-224ENST00000545894 EIF3HO15372 352 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDB1-224ENST00000545894 EPB41P11171 864 aaKnown RBP12.67□□□□□ -0.38
DDB1-224ENST00000545894 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
DDB1-224ENST00000545894 MAGEA1P43355 309 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms