RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RTKN2Q8IZC4 609 aa19.86■□□□□ 0.77
GNE-204ENST00000539208 PARD6BQ9BYG5 372 aa19.86■□□□□ 0.77
GNE-204ENST00000539208 MYO6Q9UM54 1294 aa19.86■□□□□ 0.77
GNE-204ENST00000539208 POTEB2H3BUK9 544 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 STAT2P52630 851 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 HERC4Q5GLZ8 1057 aaPredicted RBP19.85■□□□□ 0.77
GNE-204ENST00000539208 KIAA1328Q86T90 577 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 SYT2Q8N9I0 419 aaPredicted RBP19.85■□□□□ 0.77
GNE-204ENST00000539208 JAKMIP2Q96AA8 810 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 KCTD10Q9H3F6 313 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 TRIM10Q9UDY6 481 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 HDAC9Q9UKV0 1011 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 TRAF5O00463 557 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 PNMA6AP0CW24 399 aaPredicted RBP19.85■□□□□ 0.77
GNE-204ENST00000539208 SPATA31C1P0DKV0 1188 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 PPP4R3CPQ6ZMV5 832 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 CAMKK2Q96RR4 588 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 EPC1Q9H2F5 836 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 GOPCQ9HD26 462 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 ZNF70Q9UC06 446 aaPredicted RBP19.85■□□□□ 0.77
GNE-204ENST00000539208 DNM3Q9UQ16 869 aa19.85■□□□□ 0.77
GNE-204ENST00000539208 POTEFA5A3E0 1075 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 MSH4O15457 936 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 LCA5LO95447 670 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 POTEIP0CG38 1075 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 EDRF1Q3B7T1 1238 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 FKBP1CQ5VVH2 108 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 CC2D1AQ6P1N0 951 aaPredicted RBP19.84■□□□□ 0.77
GNE-204ENST00000539208 POTEGQ6S5H5 508 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 POTEEQ6S8J3 1075 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 SCFD1Q8WVM8 642 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 CCDC42Q96M95 316 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 PURBQ96QR8 312 aaKnown RBP19.84■□□□□ 0.77
GNE-204ENST00000539208 POLR3CQ9BUI4 534 aaPredicted RBP19.84■□□□□ 0.77
GNE-204ENST00000539208 TSGA10Q9BZW7 698 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 MMRN2Q9H8L6 949 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 EMILIN3Q9NT22 766 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 TCP10L2B9ZVM9 353 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 EPHB6O15197 1021 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 GABPB1Q06547 395 aaPredicted RBP19.84■□□□□ 0.77
GNE-204ENST00000539208 BRD3Q15059 726 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 DLGAP5Q15398 846 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 NCAPH2Q6IBW4 605 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 TRAPPC11Q7Z392 1133 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 TTLL6Q8N841 843 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 MSANTD4Q8NCY6 345 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 FGFBP2Q9BYJ0 223 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 FAM207AQ9NSI2 230 aaPredicted RBP19.84■□□□□ 0.77
GNE-204ENST00000539208 PUF60Q9UHX1 559 aaKnown RBP19.84■□□□□ 0.77
GNE-204ENST00000539208 VAV3Q9UKW4 847 aa19.84■□□□□ 0.77
GNE-204ENST00000539208 NPHP3-ACAD11A0A0J9YXS1 232 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 TBC1D12O60347 775 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 PLA2G6O60733 806 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 KRT18P05783 430 aaKnown RBP19.83■□□□□ 0.77
GNE-204ENST00000539208 VAV2P52735 878 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 GIT2Q14161 759 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 SPDYE2Q495Y8 402 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 PAPD7Q5XG87 772 aaKnown RBP19.83■□□□□ 0.77
GNE-204ENST00000539208 BAP1Q92560 729 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 UIMC1Q96RL1 719 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 VPS33BQ9H267 617 aa19.83■□□□□ 0.77
GNE-204ENST00000539208 CNTNAP1P78357 1384 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 CTAGE15A4D2H0 777 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 CCDC151A5D8V7 595 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 CTAGE8P0CG41 777 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 ECE1P42892 770 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 SPA17Q15506 151 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 EZH2Q15910 746 aaKnown RBP19.83■□□□□ 0.76
GNE-204ENST00000539208 CCDC40Q4G0X9 1142 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 CTAGE6Q86UF2 777 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 TRIM59Q8IWR1 403 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 CTAGE4Q8IX94 777 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 SPICE1Q8N0Z3 855 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 NEK11Q8NG66 645 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 LACRTQ9GZZ8 138 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 ARHGAP20Q9P2F6 1191 aa19.83■□□□□ 0.76
GNE-204ENST00000539208 RCCD1A6NED2 376 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 HOXA13P31271 388 aaPredicted RBP19.82■□□□□ 0.76
GNE-204ENST00000539208 KCNMA1Q12791 1236 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 OGFOD1Q8N543 542 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 NUCKS1Q9H1E3 243 aaKnown RBP19.82■□□□□ 0.76
GNE-204ENST00000539208 ANKZF1Q9H8Y5 726 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 ARFGAP3Q9NP61 516 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 TBC1D7Q9P0N9 293 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 RAB21Q9UL25 225 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 FAM184BQ9ULE4 1060 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 ZBTB21Q9ULJ3 1066 aa19.82■□□□□ 0.76
GNE-204ENST00000539208 IGLV3-22A0A075B6J6 115 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 ANO9A1A5B4 782 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 PSMC6P62333 389 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 KIF5AQ12840 1032 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 KIAA1755Q5JYT7 1200 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 MTMR14Q8NCE2 650 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 CHURC1Q8WUH1 139 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 HNRNPLLQ8WVV9 542 aaKnown RBP19.81■□□□□ 0.76
GNE-204ENST00000539208 SYN2Q92777 582 aaPredicted RBP19.81■□□□□ 0.76
GNE-204ENST00000539208 RANBP17Q9H2T7 1088 aaKnown RBP19.81■□□□□ 0.76
GNE-204ENST00000539208 ZSWIM4Q9H7M6 989 aa19.81■□□□□ 0.76
GNE-204ENST00000539208 CLRN2A0PK11 232 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms